Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  419 bits (1078), Expect = e-122
 Identities = 208/364 (57%), Positives = 260/364 (71%), Gaps = 4/364 (1%)

Query: 2   VRLKRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFD 61
           +R  + L P     LFA    A     T+ VYNW DYI   TL  FQ  SG+K+VYD+FD
Sbjct: 1   MRHLQALIPAAFTLLFATTTQAAP---TVSVYNWTDYIGDTTLADFQASSGIKVVYDVFD 57

Query: 62  TNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEAN 121
           +NE LE KLL G +GYDVVVPSN FLA+Q +AG F PLDRSKLPNWQHLDP L+K +E N
Sbjct: 58  SNETLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQN 117

Query: 122 DPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSP 181
           DPGN++AVPY++GT  IG+N  KVKAALG +  +DSW ++F+ EN+ KLKQCGVA +DSP
Sbjct: 118 DPGNQYAVPYLWGTNGIGYNVDKVKAALGVDH-IDSWAVLFEPENLKKLKQCGVAFMDSP 176

Query: 182 SEILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGY 241
            E+ P  L YLG+ P S+KP DY KAE  +L++RP+ITYFHSSKY++D+ANGD+C+A GY
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGY 236

Query: 242 SGSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEV 301
           SG   QAANRA EA NGV V   +PKEG+ +WFD+LAIPK A NPE A  FINYLL P+V
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296

Query: 302 IAPISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWT 361
           IA +S  VGY N N DA   ++ ++ NNP +YP  E + KLY     +    R  TR+W+
Sbjct: 297 IAKVSATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWS 356

Query: 362 RIKS 365
           +IKS
Sbjct: 357 KIKS 360