Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Dickeya dianthicola ME23

 Score =  429 bits (1102), Expect = e-125
 Identities = 204/363 (56%), Positives = 273/363 (75%), Gaps = 1/363 (0%)

Query: 5   KRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNE 64
           K+ L+  +   + A ++ A AE++TL VYNW DYI P TL  FQK+SG+ +VYD+FD+NE
Sbjct: 6   KKWLSGVLTGLMMAASVTASAEEKTLHVYNWSDYIAPDTLENFQKESGINVVYDVFDSNE 65

Query: 65  ALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPG 124
            LE KL+ G++G+D+VVPS  FL +QI AGVFQPLD+SKLPN+++LDP LMKLIE +DPG
Sbjct: 66  VLEGKLMAGSTGFDLVVPSASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHDPG 125

Query: 125 NKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEI 184
           +K+AVPY++ T  IG+N  KVKA LG +APV+SWDL+ K EN+ KLK CGVA LD+P+EI
Sbjct: 126 HKYAVPYLWATTGIGYNVDKVKAILGKDAPVNSWDLVLKPENLEKLKSCGVAFLDAPAEI 185

Query: 185 LPLALQYLGLPPNSDKPADY-KKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSG 243
               L Y G  PNS   +DY K A +L+LK+RP + YFHSS+Y+ D+ANGDICVA+G++G
Sbjct: 186 YATVLNYQGKNPNSANESDYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICVAIGWAG 245

Query: 244 SFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIA 303
              QAANRA++A NGV +   +PKEGA  +FD+ AIPK A N + A+ F+NYLL+P+VIA
Sbjct: 246 DVMQAANRAKDAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLKPDVIA 305

Query: 304 PISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRI 363
            +S+ V Y NPNK+AT  V   +RNNPN+YP A+  AKL+TLK  +   +R  TR+WT++
Sbjct: 306 NVSNHVYYANPNKEATALVKEEVRNNPNIYPPADIRAKLFTLKVQSPKIDRVITRSWTKV 365

Query: 364 KSG 366
           KSG
Sbjct: 366 KSG 368