Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 370 a.a., putrescine ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score =  424 bits (1091), Expect = e-123
 Identities = 203/364 (55%), Positives = 270/364 (74%), Gaps = 2/364 (0%)

Query: 5   KRLLAPFIAATLFAGALHA-QAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTN 63
           K+ L+  +A  L A ++    AEQ+TL +YNW DYI P T+  F+K++G+K+VYD+FD+N
Sbjct: 6   KKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSN 65

Query: 64  EALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDP 123
           E LE KL+ G++G+D+VVPS  FL +Q+ AGVFQPLD+SKLP W++LDP L+KL+  +DP
Sbjct: 66  EVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDP 125

Query: 124 GNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSE 183
            NKFA+PYM+ T  IG+N  KVKA LG+NAPVDSWDLI K EN+ KLK CGV+ LD+P E
Sbjct: 126 DNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEE 185

Query: 184 ILPLALQYLGLPPNSDKPADYK-KAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYS 242
           +    L YLG  PNS K  DY   A +L+LK+RP+I YFHSS+Y+ D+ANGDICVA+G++
Sbjct: 186 VFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWA 245

Query: 243 GSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVI 302
           G   QA+NRA+EA NGV V   +PKEGA  +FD+ A+P  A N ++A+ F+NYLLRP+V+
Sbjct: 246 GDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVV 305

Query: 303 APISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTR 362
           A ISD V Y N NK AT  V+  +R+NP +YP A+  AKL+TLK      +R RTRAWT+
Sbjct: 306 AHISDHVFYANANKAATPLVSAEVRDNPGIYPPADVRAKLFTLKVQDPKIDRVRTRAWTK 365

Query: 363 IKSG 366
           +KSG
Sbjct: 366 VKSG 369