Pairwise Alignments

Query, 99 a.a., DNA-binding protein HU-alpha from Pseudomonas putida KT2440

Subject, 95 a.a., DNA-binding protein HU-beta from Variovorax sp. SCN45

 Score = 82.4 bits (202), Expect = 1e-21
 Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 1/93 (1%)

Query: 1  MRKPELAAVIADKADLTKEKANQVLNAILDSITGALDK-DTVTLVGFGTFEKRHRGARTG 59
          + K EL A IA   +L+K  A + L+A +++++ AL   DTV L+GFGTF    R  RTG
Sbjct: 1  LNKTELIAAIATDTNLSKADAGRALDAAIENLSRALAAGDTVQLIGFGTFAVASRPERTG 60

Query: 60 KNPQTGEPVKIKASNTVAFKPGKNLRDSVNAPA 92
          +NP TGEP+ IKAS    F  GK L+D+VNA A
Sbjct: 61 RNPSTGEPMTIKASKAPKFTAGKALKDAVNAVA 93