Pairwise Alignments

Query, 99 a.a., DNA-binding protein HU-alpha from Pseudomonas putida KT2440

Subject, 90 a.a., HU, DNA-binding transcriptional regulator, alpha subunit from Escherichia coli BL21

 Score = 87.0 bits (214), Expect = 4e-23
 Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)

Query: 1  MRKPELAAVIADKADLTKEKANQVLNAILDSITGALDK-DTVTLVGFGTFEKRHRGARTG 59
          M K +L  VIA+KA+L+K +A   L + L +IT +L + D V LVGFGTF+  HR  RTG
Sbjct: 1  MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG 60

Query: 60 KNPQTGEPVKIKASNTVAFKPGKNLRDSV 88
          +NPQTG+ +KI A+N  AF  GK L+D+V
Sbjct: 61 RNPQTGKEIKIAAANVPAFVSGKALKDAV 89