Pairwise Alignments

Query, 99 a.a., DNA-binding protein HU-alpha from Pseudomonas putida KT2440

Subject, 90 a.a., HU, DNA-binding transcriptional regulator, beta subunit from Escherichia coli BL21

 Score = 81.6 bits (200), Expect = 2e-21
 Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 1/90 (1%)

Query: 1  MRKPELAAVIADKADLTKEKANQVLNAILDSITGALDK-DTVTLVGFGTFEKRHRGARTG 59
          M K +L   IA  AD++K  A + L+AI+ S+T +L + D V LVGFGTF  + R ARTG
Sbjct: 1  MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG 60

Query: 60 KNPQTGEPVKIKASNTVAFKPGKNLRDSVN 89
          +NPQTG+ + I A+   +F+ GK L+D+VN
Sbjct: 61 RNPQTGKEITIAAAKVPSFRAGKALKDAVN 90