Pairwise Alignments

Query, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

Subject, 1196 a.a., transcription-repair coupling factor from Rhodanobacter sp000427505 FW510-R12

 Score =  224 bits (570), Expect = 2e-62
 Identities = 156/460 (33%), Positives = 235/460 (51%), Gaps = 21/460 (4%)

Query: 192  LAPLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRLRESLRSLRA-P 250
            +A L    RY    P  A L  L  G  W + R    E +    ++     + R  R   
Sbjct: 571  VAQLGLVSRYSGTAPELAPLHSLG-GDAWERARRKAAEKVRDVAAELLAIYAQRQARGGE 629

Query: 251  VLPRATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVGAGKTVVAALA 310
             LP   +L  ++ +   F+ T  Q+     +  DL+    M R++ GDVG GKT VA  A
Sbjct: 630  SLPIDRQLVEEFGSTFPFEETPDQESAIEAVLADLAAPRAMDRVICGDVGFGKTEVALRA 689

Query: 311  ALQALEAGYQVALMAPTEILAEQHYITFKRWLEPLGIEVAWLAGKLKGKARAASLEQIAN 370
            A     AG QVA++ PT +LA+QHY  F        + V  L+     K    +L+++A+
Sbjct: 690  AFATATAGKQVAVLVPTTLLAQQHYRNFADRFADWPVRVDVLSRFKSAKEVNEALKRLAD 749

Query: 371  GA-PMVVGTHALFQEEVRFKHLALAIIDEQHRFGVQQRLALRRKGVAGELCPHQLIMTAT 429
            G   ++VGTH L Q +V+F++L L I+DE+ RFGV+Q+  L++     +L    L MTAT
Sbjct: 750  GQIDVIVGTHKLLQPDVKFRNLGLVIVDEEQRFGVRQKEQLKKLRAEVDL----LTMTAT 805

Query: 430  PIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAACAEGRQAYWVC 489
            PIPRTL M+     D S++   P  R+ V T + A      + E ++   + G Q Y++ 
Sbjct: 806  PIPRTLNMAMAGLRDLSLIATPPEHRSAVRTFISAWDPA-TIREALQRELSRGGQVYFLH 864

Query: 490  TLIEESEELTCQAAESTYEELGSALGELKVGLIHGRMKPAEKAEIMAEFKAGNLQLLVAT 549
              +        Q+ E T  EL   + + ++ + HG+M   E  ++MA+F      +LV T
Sbjct: 865  NEV--------QSIERTVRELEELVPDARIRIAHGQMPERELEQVMADFHRQRFNVLVCT 916

Query: 550  TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLS-----QI 604
            T+IE G+D+P A+ +II+  +  GLAQLHQLRGRVGR    ++  L+     S     Q 
Sbjct: 917  TIIETGIDIPTANTIIIDRADHFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSITADAQK 976

Query: 605  GRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQTGLLQ 644
              E L  + E   GF +A  DLE+RG GE+LG  Q+G +Q
Sbjct: 977  RLEALASLEELGAGFTLATHDLEIRGAGELLGDEQSGQIQ 1016