Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 747 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

 Score =  424 bits (1089), Expect = e-122
 Identities = 230/687 (33%), Positives = 386/687 (56%), Gaps = 43/687 (6%)

Query: 50  LAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLTQMNFE 109
           L +A ILAD+ +D  SL+AA+L+  + +  I    + Q+FG  VA+L+DGV ++  ++  
Sbjct: 69  LEIAEILADLKLDQDSLIAAVLYRGVREGHIQLATVGQRFGSVVAKLIDGVLRMAAISAS 128

Query: 110 TK--------AEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKE 161
                      + Q EN +KM +AM  D+RV L+KLA+R   +R ++    EKR R+A+E
Sbjct: 129 LSPRQSMVLGTQGQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKTADDEKRNRVARE 188

Query: 162 TLEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLA 221
             +IYAP+A+RLG+  ++ E EDL F+ + P +   I   +   R +R+  +  + + L 
Sbjct: 189 VFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIATLLHERRLDRERFITDVMNQLR 248

Query: 222 NCLAADGIEGEVSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVH 281
           + L A G+E ++SGR KH+Y I++KM+ K  AF++I DV A R++V ++  CY  LG VH
Sbjct: 249 SELQATGVEADISGRAKHIYSIWRKMQRKGLAFSQIYDVRAVRVLVPEMRDCYTALGIVH 308

Query: 282 NLYKPLPGRFKDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLY 341
            L++ +P  F DYIA PK NGY+SLHT + G  G  +E+QIRT  M E A  G+ AHW Y
Sbjct: 309 TLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRY 368

Query: 342 KSNDDEQPKGSHARARQWVKGILELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMEL 401
           K  D +     +     W++ +LE  +  G+     E +++D+ PD VY+FTP G  ++L
Sbjct: 369 KGTDVKAGSNQYEEKISWLRQVLEWHEELGDIGGLAEQLRVDIEPDRVYIFTPDGHAIDL 428

Query: 402 PKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN- 460
           PKG+T +DFAY VHT++G++C   +IN R+ PL+  LQ+G  VEI+++    P+  WLN 
Sbjct: 429 PKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNP 488

Query: 461 ---FVVSGKARTNIRHALKQQRRSESISLGERLLNKVLTGFDSSLEKIPQERIQSILAEY 517
              ++ + +AR  I H  K Q R ++++ G+ LL + L         +PQ     +  + 
Sbjct: 489 NLGYITTSRARAKIVHWFKLQARDQNVAAGKTLLERELGRLG-----LPQVDFDKLAEKA 543

Query: 518 RLELIEDLLEDIGLGN-RMAYVV--ARRLLSAE--GEQL-----------PAPEGPLAIR 561
            +++ ED+   +G G+ R+A +V  A++L+  E   EQL           P   G + I+
Sbjct: 544 NMKIAEDMFAALGAGDLRLAQLVNLAQQLVEPERGSEQLELIPRKATGYKPGKRGDIQIQ 603

Query: 562 GTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNISEI-RHNPEKCVQLSWAKD 620
           G   L+   A CC P+PGD IVG+++ G+G+ +H ++C ++ ++    PE+ +Q+SW   
Sbjct: 604 GVGNLMTQIAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLGGREPERIIQVSWGPV 663

Query: 621 ITGEFNVELRVELEHQRGLI-----ALLASSVNAADGNIEKISMDERDGRISVVQLVVSV 675
               + V++ +    + GL+      LL   +N    N    +   ++   +++ L + +
Sbjct: 664 PVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAVN----TRSNKEDNTALMSLTIEI 719

Query: 676 HDRVHLARVIKKLRTLTGVVRITRMRT 702
                L R++ ++  L  ++   R RT
Sbjct: 720 PGLDALGRLLGRISQLPNIIETRRNRT 746