Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 746 a.a., Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I from Variovorax sp. SCN45

 Score =  335 bits (858), Expect = 6e-96
 Identities = 228/736 (30%), Positives = 356/736 (48%), Gaps = 68/736 (9%)

Query: 6   ALAERLSTYLGPEQVNLVRRAYFYAEQAHDGQRRRSGEPYVTHPLAVASILADMHMDHQS 65
           A AER      P   N++ RA  +AE     +   +GE  + H  AVA+I+A M      
Sbjct: 26  ATAER-----SPVMENMLARARAFAEPLIADETLDTGENTLAHADAVAAIVAKMGGSEAM 80

Query: 66  LMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLTQMNFETK----------AEAQ 115
             A+ L    +     +E +++ FG+  A L    +KL ++  + +          A AQ
Sbjct: 81  QAASYLVYACQHLNRPQEVIAKVFGDNFAALAVETTKLVRVQEQARSAAQGHHIEGAGAQ 140

Query: 116 AENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGM 175
            EN +KM +A +RD+RV++++LA RL  +R            +A+E+L+++AP+ANRLG+
Sbjct: 141 TENVRKMLLAFSRDLRVVMLRLASRLQTLRHAAASKQPAPEGVARESLQVFAPLANRLGI 200

Query: 176 HTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLANCLAADGIEGEVSG 235
             V+ E EDL F+ + P    LI R +   R  R+  V ++   L   L  +G++  V G
Sbjct: 201 WQVKWEIEDLSFRFLEPETYKLIARLLDEKRIEREGHVEQLRSQLERELQNEGVKATVQG 260

Query: 236 RQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYI 295
           R K++Y I KKMRGK   F ++ D+ A R++V  V  CY  L  VH+ ++P+   F DYI
Sbjct: 261 RPKNIYSIVKKMRGKSLDFAQVFDILALRVVVSDVKDCYAALAWVHSHFQPIDEEFDDYI 320

Query: 296 AIPKANGYQSLHTT----LFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSNDDEQPKG 351
           A PK NGYQSLHT     + G  G PIEIQIRT EM + A +G+AAHW YK        G
Sbjct: 321 ARPKPNGYQSLHTVVRELVDGKPGKPIEIQIRTEEMHDHAEHGVAAHWAYKE------AG 374

Query: 352 SHARARQWVKG-----ILELQQRAGNSLEFIESVK-IDLFPDEVYVFTPKGRIMELPKGS 405
               A  W  G     I  L+Q      +    ++   LF D +YV TP   I+ELP+G+
Sbjct: 375 HKGYAGVWASGEYDAKIAVLRQLLAWERDLSGGLQGQGLFDDRIYVLTPDAAIVELPQGA 434

Query: 406 TAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN----F 461
           T VDFAY VHT +G+ C   R++  + PL+ PL +G TVEI++A    P+  WLN    +
Sbjct: 435 TPVDFAYTVHTTLGHRCRGARVDGAMVPLNTPLSNGQTVEIIAAKEGGPSRDWLNAELGY 494

Query: 462 VVSGKARTNIRHALKQQRRSESISLGERLLNKVLTGFDSSLEKIPQERIQSILAEYRLEL 521
           + S +AR  +R     Q   E+++ G   + K+L       E     R++ + ++   + 
Sbjct: 495 LASHRARAKVRAWFNAQITHETVARGREAVEKLL-----QREGKTAVRLEDLASQLGFKS 549

Query: 522 IEDLLEDIGLGNRMAYVVARRLLSAEGEQLPAP------------------EGPLAIRGT 563
            + L E +G        +   L   E    PAP                  +G + + G 
Sbjct: 550 ADHLFEVVGKDEFSLRNIETLLRPPE----PAPGPDDGVLIKKARGSEKSGKGGVLVVGV 605

Query: 564 EGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNISEI-RHNPEKCVQLSWAKDIT 622
             L+   AKCC P P D I G ++ G G+ VH  +C N   +   + E+ + + W     
Sbjct: 606 SSLMTQLAKCCKPAPPDSIRGFVTRGHGVSVHRSDCSNFRTMASKDNERVIDVEWGAPKK 665

Query: 623 GE----FNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDR 678
           G     + V++ VE   ++GL+  ++        N+  +      G  + +   V + D 
Sbjct: 666 GAEAPVYAVDVAVEAADRQGLLRDISDVFAREKMNVIGVQTQSIKG-TAWMTFTVEIADA 724

Query: 679 VHLARVIKKLRTLTGV 694
             L +V+  +  + GV
Sbjct: 725 ARLTQVLGVVTAVIGV 740