Pairwise Alignments

Query, 240 a.a., Ribonuclease PH from Pseudomonas putida KT2440

Subject, 701 a.a., polynucleotide phosphorylase/polyadenylase from Pseudomonas simiae WCS417

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 24/203 (11%)

Query: 3   RPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTK--VICTVSVENGVPRF--LKGQGQG 58
           R  GR    +R + I         GS L   G+T+  V+ T+           L+G+ + 
Sbjct: 316 RIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKD 375

Query: 59  WLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCD 118
                Y   P S GE  +     G  G R +   RL  RS+ A L  + +   T+ V  +
Sbjct: 376 PFMLHYNFPPFSVGECGRM----GGAGRREIGHGRLARRSIAAMLPAADVFPYTIRVVSE 431

Query: 119 VIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHMIAAVSVGMY-QGE--AVL 175
           + +++G +  AS+ GA +AL DA            G P+K  +A +++G+  +GE  A+L
Sbjct: 432 ITESNGSSSMASVCGASLALMDA------------GVPMKAPVAGIAMGLVKEGEKFAIL 479

Query: 176 -DLDYLEDSAAETDLNVVMTSAG 197
            D+   ED   + D  V  T+ G
Sbjct: 480 TDILGDEDHLGDMDFKVAGTAKG 502