Pairwise Alignments

Query, 240 a.a., Ribonuclease PH from Pseudomonas putida KT2440

Subject, 771 a.a., Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) from Sphingobium sp. HT1-2

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 60/246 (24%), Positives = 98/246 (39%), Gaps = 25/246 (10%)

Query: 2   KRPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSV----ENGVPRFLKGQGQ 57
           +R  GR   Q+R I     +     GS L   G+T+ ICT ++       +   L G   
Sbjct: 315 QRIDGRTTTQIRPIEAMVGFLPRTHGSALFTRGETQAICTTTLGTKDAEQMIDGLTGLHY 374

Query: 58  GWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDC 117
                 Y   P S GE  +     G  G R +   +L  R+L   L        T+ V  
Sbjct: 375 ENFMLHYNFPPYSVGEVGR----FGAPGRREVGHGKLAWRALHPVLPTKDEFPYTIRVLS 430

Query: 118 DVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHMIAAVSVGM-YQGE---A 173
           D+ +++G +  A++ G  +++ DA            G PLK  ++ +++G+  +G     
Sbjct: 431 DITESNGSSSMATVCGGSLSMMDA------------GVPLKRPVSGIAMGLILEGSDFAV 478

Query: 174 VLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFEL 233
           + D+   ED   + D  V  T A G   +Q   + A    E F   L  A++G   I   
Sbjct: 479 ISDILGDEDHLGDMDFKVAGTEA-GITTMQMDIKVAGITQEIFETALRQAKEGRAHILGE 537

Query: 234 QQAALA 239
              AL+
Sbjct: 538 MNKALS 543



 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 54/182 (29%), Positives = 73/182 (40%), Gaps = 22/182 (12%)

Query: 18  TRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTA----EYGMLPRSTGE 73
           T    + A+ +VL  +G+T V+C V+    V    +GQ    LT     +Y    R  G 
Sbjct: 20  TGRIARQADAAVLATYGETVVLCAVTAAKSVK---EGQDFFPLTVHYQEKYSAAGRIPGG 76

Query: 74  RNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITG 133
             +RE  RG     TL + RLI R +R         +I   V   V+  DG +    +  
Sbjct: 77  FFKRE--RGATEKETL-VSRLIDRPIRPLFPEGFYNEIN--VIAQVMSFDGESEPDIV-- 129

Query: 134 AMVALCDALAVIKKRGGLKGGNPLKHMIAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVM 193
           AM+A   AL +         G P    I A  VG   GE  L+    E    E DL V  
Sbjct: 130 AMIAASAALTL--------SGVPFMGPIGAARVGYKDGEYQLNPSLDEVKTGELDLVVAA 181

Query: 194 TS 195
           TS
Sbjct: 182 TS 183