Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  463 bits (1191), Expect = e-135
 Identities = 239/524 (45%), Positives = 325/524 (62%), Gaps = 9/524 (1%)

Query: 11  TTLFAAGAAQAAP------LSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFDAAQ 64
           + L A G    +P      L  CSE SP GFD  QY S T  +A A+ + NRLVEF+   
Sbjct: 8   SALLALGLVSQSPVLLANNLVFCSEGSPAGFDTAQYTSATDNDA-AEPIYNRLVEFERGG 66

Query: 65  GKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYPAHA 124
             V P+LAT W VS +GL Y F LR+ V+FHS   F PSR  NADDVLF+F RML   H 
Sbjct: 67  TAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDKGHR 126

Query: 125 WHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSAEYA 184
           + +  P  +P+   + L   I  +E   P TV FTL+  DA F+  L+M FASI SAEYA
Sbjct: 127 FRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASILSAEYA 186

Query: 185 DKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPA-VDPLIFAITTDA 243
           ++LL +G P  +N QPIGTGPFVFQR+QKD+ +RY+ N DY+A     +D L+F+I TD 
Sbjct: 187 EQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSINTDP 246

Query: 244 NVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLDKPEVR 303
           +VR+QKL+R ECQV L P+P D+     D  L+V   P F   ++A N+QHPP D+ EVR
Sbjct: 247 SVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPFDRLEVR 306

Query: 304 QAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGLAE 363
           QA+++A +++A L+AV++D+   A    PP  WSY   +   P   +KA+ L+ +AG+  
Sbjct: 307 QAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLIQQAGVKP 366

Query: 364 GFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHDLLF 423
           G   T+W  P     NPN  L A+MLQAD +K+G K  I   EWGE ++R K GEHD+  
Sbjct: 367 GTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKNGEHDIAL 426

Query: 424 MGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQQA 483
           +GW GDNGDPDN+L   +SC A+ S  N++++CD + D L+   +   D++ R+ LYQQA
Sbjct: 427 IGWTGDNGDPDNWLGTLYSCDAIGS-NNYSQWCDPQYDSLVKQAKQVTDRTQRTALYQQA 485

Query: 484 QTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527
           Q  ++QQ    P+AH   +  L   V  ++VSPFGR DFS V+V
Sbjct: 486 QQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529