Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  537 bits (1383), Expect = e-157
 Identities = 268/530 (50%), Positives = 352/530 (66%), Gaps = 3/530 (0%)

Query: 1   MRVAALSLLFTTLFAAGAAQAA--PLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLV 58
           M+   L L    L   GA Q A  PL VC+EASPEGFD+VQY +  T +A+A+ + NRLV
Sbjct: 14  MKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLV 73

Query: 59  EFDAAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRM 118
           +F     ++ P+LA  W +SADGL Y F LR  VKFH+T YFKP+R LNADDVL+S  R 
Sbjct: 74  DFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQ 133

Query: 119 LYPAHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASI 178
           L P H WH     GYP+ +S+    L+K++     +TV  TLS P+A FL  ++MGF SI
Sbjct: 134 LDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSI 193

Query: 179 YSAEYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFA 238
           YSAEY D+LLK+G   +LN++PIGTGPF+FQR+ KDA VR++ NPDYF GKP  D L+FA
Sbjct: 194 YSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFA 253

Query: 239 ITTDANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLD 298
           I  D+NVRLQKL+  ECQVAL PKP D+    QD  LKV    A +T ++A+N+QH  L+
Sbjct: 254 IAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLN 313

Query: 299 KPEVRQAINLAFDRQAYLKAVF-EDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLA 357
              VR+AIN+AFDRQ ++  +F + +A+    PYPP    Y       P DL KA+ALL+
Sbjct: 314 DVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLS 373

Query: 358 KAGLAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAG 417
           +AG+ EG   T++TR  G   NPNP L A+MLQADL +IG+K +IRV+EW E++RRAK G
Sbjct: 374 QAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNG 433

Query: 418 EHDLLFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRS 477
           E DL+  GWAGDNGDPDNFLSP  SC AV+SG N+AR+C+ +  +LIS  R   D   R+
Sbjct: 434 EADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERA 493

Query: 478 RLYQQAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527
           RLY +A  +   +  W+ +AHP   T +R  VEGY ++P    +F+   V
Sbjct: 494 RLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFATTKV 543