Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 570 a.a., peptide ABC transporter substrate-binding protein SapA from Dickeya dianthicola ME23

 Score =  296 bits (758), Expect = 1e-84
 Identities = 162/473 (34%), Positives = 250/473 (52%), Gaps = 1/473 (0%)

Query: 53  LMNRLVEFDAAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVL 112
           L +RL+  D    +++P LA  W V+ +G  Y FTLR DV F  T++F PSR +NADDVL
Sbjct: 67  LYDRLLGVDPYTYRLMPELAQHWDVTDNGSTYRFTLRRDVPFQRTAWFTPSRTMNADDVL 126

Query: 113 FSFQRMLYPAHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLS 172
           FSFQRML   H +H    G YP+  SLQL   +++I      ++   L  PDA+FL  L+
Sbjct: 127 FSFQRMLNKKHPFHDVNGGDYPYFDSLQLADNVQSIRKLGDYSIEIRLHSPDASFLWHLA 186

Query: 173 MGFASIYSAEYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAV 232
             +A + SAEYA +L +    E L+ QP+GTGP+    ++    VR + + DY+ G+P +
Sbjct: 187 THYAPVLSAEYAQQLTRQDRRELLDRQPVGTGPYRLDEYRYGQYVRLKRHDDYWRGQPRM 246

Query: 233 DPLIFAITTDANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINS 292
           + ++  + +    RL KL  GEC V   P    +     D  L+++  P    A++A N 
Sbjct: 247 EQVLVDLGSGGTGRLSKLLTGECDVLAYPAASQLTILRNDPRLRLSLRPGMNVAYLAFNV 306

Query: 293 QHPPLDKPEVRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKA 352
           + PPLD   VR AI LA +    +++++  +A  A    P  +W+Y  +      + +KA
Sbjct: 307 RKPPLDDSRVRHAIALAINNDRLMQSIYYGTAETAASILPRASWAYDNEAQVTEYNPEKA 366

Query: 353 KALLAKAGLAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIR 412
           +  L + G+       +W   +    NP+P   A+++QADLA++GI+  I  +E      
Sbjct: 367 RQQLKELGIT-NLQLQLWVPSASQSYNPSPVKTAELIQADLAQVGIRVTIMPVEGRFQEA 425

Query: 413 RAKAGEHDLLFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTND 472
           R     HDL   GWA D+ DPD+   P  SCAA+ S TN+A +CD   DQ++    ++  
Sbjct: 426 RLMEMNHDLTLAGWATDSNDPDSVFRPLLSCAAIRSQTNYAHWCDPGFDQVLQDALSSQQ 485

Query: 473 QSVRSRLYQQAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKV 525
            S R   Y+ A  ++ +Q   +PLA        R  ++G  +SPFG   F+ V
Sbjct: 486 LSRRMEYYRVAHHILAEQLPVLPLASSLRMQAYRYDMKGLVLSPFGNASFAGV 538