Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 530 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  445 bits (1144), Expect = e-129
 Identities = 233/525 (44%), Positives = 320/525 (60%)

Query: 3   VAALSLLFTTLFAAGAAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFDA 62
           +  ++L   TL AA AA A  L  CSE SPE F+   Y S T+ +A+A  + NRLV+F  
Sbjct: 5   ITRVALAALTLAAAQAACANTLVYCSEGSPENFNPQLYTSGTSVDASAVPIYNRLVDFKV 64

Query: 63  AQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYPA 122
              ++VPSLA  W +S DG  Y F LR  VKFH  + F PSR  NADDV+FSFQR     
Sbjct: 65  GTTELVPSLAERWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVIFSFQRQRDLN 124

Query: 123 HAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSAE 182
           H +HK + G Y + +SL   SLI AI+      VRFTLSH +A FLA L+  FAS+ SAE
Sbjct: 125 HPYHKVSGGTYANFESLSFRSLITAIDRVDDYRVRFTLSHAEAPFLADLAWYFASVLSAE 184

Query: 183 YADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAITTD 242
           YAD++LKAG PEK++ +PIGTGPF   ++QKD+ + Y+A PDY+ GK  +D L+F+IT D
Sbjct: 185 YADQMLKAGAPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPDYWQGKAKLDRLVFSITPD 244

Query: 243 ANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLDKPEV 302
           A+VR  KL++ ECQV   P P ++A+   + ++ +         F+A N++  PLD  +V
Sbjct: 245 ASVRYAKLRKNECQVMPFPNPAELADIKSNKDITLMQKAGLNIGFLAFNTRKAPLDNLKV 304

Query: 303 RQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGLA 362
           RQA+ +A ++ A ++AVF+ +  AA    PP  WS A DL  Y  D  KA+ALL  AGLA
Sbjct: 305 RQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAADLKDYEYDPGKARALLKDAGLA 364

Query: 363 EGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHDLL 422
           EG +  +W  P     NPN    A+M+QAD AK+G+ A I   EWGE ++R ++GEH   
Sbjct: 365 EGTTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVNANIVSYEWGEYLKRVRSGEHQAA 424

Query: 423 FMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQQ 482
            MGW    GDPDNF  P F+C +   G+N +++C    D+LI+  R   D   R  LY+Q
Sbjct: 425 LMGWTTATGDPDNFFGPLFTCTSANGGSNSSKWCYPPFDKLITDARAEQDHQKRVELYRQ 484

Query: 483 AQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527
           AQ ++ +QA  V +AH T    +R  V GY + PFG+  F +V +
Sbjct: 485 AQFMMHEQAPAVMIAHSTLFEPVRNTVTGYDIDPFGKHIFYQVDI 529