Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  462 bits (1190), Expect = e-134
 Identities = 237/526 (45%), Positives = 323/526 (61%)

Query: 2   RVAALSLLFTTLFAAGAAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFD 61
           RV   SL    L  A   QA  L  CSE SPEGF+   + S TT +A++  + NRLVEF 
Sbjct: 9   RVLKFSLGLLALSVAAGVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPIYNRLVEFK 68

Query: 62  AAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYP 121
               ++ P LA  W +SADG  Y F LR DVK+     FKPSR  NADDVLFSFQR +  
Sbjct: 69  NGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKEFKPSRTFNADDVLFSFQRQMDA 128

Query: 122 AHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSA 181
            H +HK + G Y + + + +  LI  IE     TVRF L+  +A FLA L+M FASI SA
Sbjct: 129 NHPFHKVSGGSYEYFEGMGMPDLISKIEKVDDYTVRFQLTRAEAPFLADLAMDFASIMSA 188

Query: 182 EYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAITT 241
           EY DK+LKAG+PEK++  PIGTGPF  Q++QKD+ + Y+    ++  KP +D L+F+IT 
Sbjct: 189 EYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTKPGIDRLVFSITP 248

Query: 242 DANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLDKPE 301
           DA+VR  KL++ ECQV   P P D+A   QD N+++   P     +++ N +  PLD  +
Sbjct: 249 DASVRYAKLQKDECQVMPYPNPADLASMKQDKNIELLQKPGLNVGYLSFNVEKKPLDNVK 308

Query: 302 VRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGL 361
           VRQA+  A ++QA ++AV++ +  AA    PP  W Y  D+  Y  D  KAKALL +AGL
Sbjct: 309 VRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYNDDVKDYAYDPAKAKALLKEAGL 368

Query: 362 AEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHDL 421
             GF   +W  P     NPN    A+M+QAD AK+G+KA+I   EWGE ++RAKAGEH  
Sbjct: 369 ENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYEWGEYLKRAKAGEHQT 428

Query: 422 LFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQ 481
           + MGW GDNGDPDNFL+  FSC A + G+N++++C    + LI   R  +DQ+ R  LY+
Sbjct: 429 VLMGWTGDNGDPDNFLATLFSCDAAKKGSNYSKWCYKPFEDLIQPARAVSDQAKRIELYK 488

Query: 482 QAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527
           QAQ ++  QA  + +AH T    +R+ V+GY + P G   F+ V+V
Sbjct: 489 QAQVVMHDQAPALIVAHSTVYEPIRKNVKGYVIEPRGVHSFNHVSV 534