Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  296 bits (757), Expect = 4e-84
 Identities = 174/445 (39%), Positives = 268/445 (60%), Gaps = 15/445 (3%)

Query: 118  ATLQRLAEQDPLTGIANRQGFQALLNARLA---ENEGRGVALGHLDLDNFRHVNDALGHQ 174
            A ++ LA  DPLT + NR      L+ ++A    +  RG AL  LDLD+F+H+ND+LGH 
Sbjct: 655  AQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRG-ALLFLDLDHFKHINDSLGHP 713

Query: 175  SGDRLILQVVARLKHQLEAGDQLARLGSDEFALLID----TRRD-ANRAEWIAERIVEAL 229
             GD ++  V ARL+  +   D +ARLG DEF +L+     TR + +N+ + +A+ + E L
Sbjct: 714  VGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTLRELL 773

Query: 230  AEPYWIDGESLLLGCSLGIAHARAQSGADP--LMWHAHIAMRQAKGSQGCTFHVFNERIN 287
            +EP ++DG  L +  S+G+A      G+ P  L+  A IA+ +AK S   T  +F+  + 
Sbjct: 774  SEPMFLDGHRLQVTPSIGVALI-PDHGSTPADLLKRADIALYRAKDSGRNTTQMFHNSMQ 832

Query: 288  RNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFV 347
            + A     +E++LR AL R E  +HYQP+++    RIVG EALVRW+H + G   PSEF+
Sbjct: 833  KTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFI 892

Query: 348  PLAEQSGLIVPLGYWVISRALRDMQALCERGL-EPLH--MAVNLSFRQFQDSQLLATLSR 404
             + E SGLI+ +G W++  A    Q L   GL +PL+  + VN+S RQF+ +  +  + R
Sbjct: 893  KVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVERVER 952

Query: 405  LILEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSL 464
             + +H +    L+ E+TE  V++  +     M  L +LGV F++DDFGTG+SS  +L  L
Sbjct: 953  SLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRL 1012

Query: 465  PITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQ 524
            P+  LK+D+SFV +      + +++ A++ +A +LNLEV+AEGVE+++QL  L+G GC  
Sbjct: 1013 PVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHL 1072

Query: 525  VQGFLVSRPLPIGELMAYLLQAPGR 549
             QG+L SRPLP+      LL   GR
Sbjct: 1073 YQGYLHSRPLPMIGFRERLLAGEGR 1097