Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  304 bits (778), Expect = 8e-87
 Identities = 167/423 (39%), Positives = 262/423 (61%), Gaps = 3/423 (0%)

Query: 120 LQRLAEQDPLTGIANRQGFQALLNARLA--ENEGRGVALGHLDLDNFRHVNDALGHQSGD 177
           L  LA  DPLT + NR  F       LA  +   RG AL  LDLD+F+ +ND+LGH  GD
Sbjct: 205 LAHLAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKIINDSLGHNVGD 264

Query: 178 RLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAEPYWIDG 237
           +L+  V  RLK     G  LARLG DEFA+L ++     +A  +A+R+++A+ +P+  DG
Sbjct: 265 QLLKLVGERLKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAMKQPFIFDG 324

Query: 238 ESLLLGCSLGIAHARAQS-GADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADL 296
             L +  S+GI+   + +  A+ L+ +A  A+ +AK +    + ++ E +  +A++  ++
Sbjct: 325 HQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEELTAHAQNRVEI 384

Query: 297 ESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLI 356
            SELRRAL + EL ++YQP  +L D R++G+EALVRW+H ERGL+PP EF+P+AE++GLI
Sbjct: 385 ASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEFIPIAERTGLI 444

Query: 357 VPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVDARWL 416
             +  WV+++A R M     +G     +A+N+S R F   +L   +++++ + G+D  +L
Sbjct: 445 ADIDAWVMNQACRQMCDWLAQGTPLSFIAINVSSRLFARRELYEQVAQVLHDTGLDPAFL 504

Query: 417 EFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFV 476
           E E+TE+AVM   EV  + +  L  LG+R ++DDFGTG+SS + L  LP+  LK+D+ FV
Sbjct: 505 ELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFV 564

Query: 477 AEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSRPLPI 536
           A +   E++  +V  +I LA ++ ++V AEG+E  EQ   L    CD  QG+   RP+P 
Sbjct: 565 AGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQGYWFGRPVPA 624

Query: 537 GEL 539
           GE+
Sbjct: 625 GEI 627