Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  319 bits (818), Expect = 2e-91
 Identities = 173/428 (40%), Positives = 255/428 (59%), Gaps = 8/428 (1%)

Query: 120 LQRLAEQDPLTGIANRQGFQALLNARLAENEGRG-------VALGHLDLDNFRHVNDALG 172
           LQ+ A  D LTG+ NR  F+  L   LA             +A+  +DLD F+ +ND+ G
Sbjct: 216 LQKRAFTDALTGLPNRVLFEDRLRHALARMNRANQLQVEECIAVLFVDLDGFKPINDSFG 275

Query: 173 HQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAEP 232
           H +GDR++     RL       D +AR+G DEF LL++   D       A R++ AL EP
Sbjct: 276 HSAGDRILCVAAERLARNTRESDTVARIGGDEFLLLLEGVHDRAECAEAANRVLRALGEP 335

Query: 233 YWIDGESLLLGCSLGIAHARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARS 292
           + + G+ L + CS+GI     Q   D L+ +A  AM +AK + G  + +F   +  +A  
Sbjct: 336 FNVQGKLLQIACSIGIVLHPEQGEPDKLVANADAAMYEAKRAGGGNYVMFESHMGADAAK 395

Query: 293 LADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQ 352
              L+S+LRRA+   + EL+YQP++N     I G+EALVRW H + GL+ P+EF+ LAE+
Sbjct: 396 QLQLQSDLRRAVELKQFELYYQPKINGVGDSISGVEALVRWNHPQHGLIGPTEFIGLAER 455

Query: 353 SGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVD 412
            GLIV LG W++  A R +     +G + + +AVNLS  Q ++   +A + R +L H V 
Sbjct: 456 FGLIVHLGDWILDEACRQIAQWQAQGTQ-MCVAVNLSVMQLREVDFVARVERALLRHNVP 514

Query: 413 ARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVD 472
           A  L  E+TE+  M   +  ++T++ L R+GV  S+DDFGTG+SS  HL  LP   +K+D
Sbjct: 515 ASLLLCEITESVAMEDIKATQRTLEGLARVGVFLSIDDFGTGYSSLSHLRKLPARQVKID 574

Query: 473 RSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSR 532
           RSFV +++ +E+ R ++ A+I LAH L L VVAEGVE+E Q  +L   GCD++QGFL SR
Sbjct: 575 RSFVQDLQTKEDARAVIDAVIRLAHALGLSVVAEGVENEAQRDILLAMGCDELQGFLFSR 634

Query: 533 PLPIGELM 540
           PLP G+L+
Sbjct: 635 PLPAGDLL 642