Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  315 bits (808), Expect = 4e-90
 Identities = 179/441 (40%), Positives = 258/441 (58%), Gaps = 4/441 (0%)

Query: 110  VRERGVLVATLQRLAEQDPLTGIANRQGFQALLNARL--AENEGRGVALGHLDLDNFRHV 167
            V +R    A ++ LA  D LT + NR      L   L  A+ +G+ V +  +DLD F+++
Sbjct: 611  VSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGVLFIDLDRFKNI 670

Query: 168  NDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAER-IV 226
            ND+LGH  GD L+  V AR+   +  GD ++RLG DEF ++++   D      + ER ++
Sbjct: 671  NDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQEILSLVERRLI 730

Query: 227  EALAEPYWIDGESLLLGCSLGIA-HARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNER 285
              + +P+ IDG  + + CS+GIA +       D LM HA +AM Q+K S   T   F   
Sbjct: 731  SLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFTPE 790

Query: 286  INRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSE 345
            +N  A+    LES LR A+ RDEL LHYQPR++   G ++ +EAL+RW+ AE G + P++
Sbjct: 791  MNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQSAELGQVRPAQ 850

Query: 346  FVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRL 405
            F+P+AE+SG IV +G WVI +A     A    GL  + +A+N+S  Q +D  LL  L   
Sbjct: 851  FIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQLRDGGLLEVLRGA 910

Query: 406  ILEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLP 465
            I  +GV    LE ELTE+ +M   E     + AL  LGV  S+DDFGTG+SS  +LN  P
Sbjct: 911  IALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLNYLNRFP 970

Query: 466  ITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQV 525
            I  LK+DRSF+ +M     +  +  A+I L H L L VVAEGVE  E+   LR   CD++
Sbjct: 971  IDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRAARCDEL 1030

Query: 526  QGFLVSRPLPIGELMAYLLQA 546
            QG+L+SRP+P G+L  ++ QA
Sbjct: 1031 QGYLISRPMPAGKLAGWIAQA 1051