Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  295 bits (754), Expect = 4e-84
 Identities = 168/437 (38%), Positives = 255/437 (58%), Gaps = 5/437 (1%)

Query: 110 VRERGVLVATLQRLAEQDPLTGIANRQGFQALLNARLAENEGRGVALG--HLDLDNFRHV 167
           V E+  L+ TLQ     D LTG+ NR     LLN  LA +   G++L    LDLD F+ V
Sbjct: 114 VTEKRQLLHTLQWRVGHDVLTGLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAV 173

Query: 168 NDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVE 227
           ND  GH  GD L+++V  RLK  L  GD +ARL  DEF L++    D ++     +R++ 
Sbjct: 174 NDGYGHAVGDLLLVEVAQRLKSILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLR 233

Query: 228 ALAEPYWIDGESLLLGCSLGIA-HARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNERI 286
           ALA P  +   +L L  S+G+  + +    AD L+ HA  AM  AK      +H+F+   
Sbjct: 234 ALAAPCVVREHTLSLSASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQ 293

Query: 287 NRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEF 346
            +  ++     + +RRALR  EL L+YQP++NL  G+++G E L+RW+   RG++PP +F
Sbjct: 294 EQELKATHQTVARVRRALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDF 353

Query: 347 VPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLI 406
           +P  EQ+ LIV +G WVI +AL  +QA   +G +P  ++VN++ R  Q S     L +L+
Sbjct: 354 LPWVEQTDLIVEIGEWVIGQALSQLQAWQRQG-QPWSLSVNIAARHLQRSDFAERLQQLL 412

Query: 407 LEH-GVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLP 465
             +  VD   L+ E+ E+  +   + V + +DA   LGVRFSLDDFGTG+SS  +L  LP
Sbjct: 413 AAYPAVDPALLDLEIVESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLP 472

Query: 466 ITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQV 525
              +K+D+SFV ++   +++  L  A+I LA     EV+AEG+ES E   +L G GC+  
Sbjct: 473 TQTIKIDQSFVRDILHDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELA 532

Query: 526 QGFLVSRPLPIGELMAY 542
           QG+ ++RP+P  ++ A+
Sbjct: 533 QGYCIARPMPASDVQAW 549