Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  305 bits (782), Expect = 5e-87
 Identities = 175/440 (39%), Positives = 263/440 (59%), Gaps = 9/440 (2%)

Query: 110  VRERGVLVATLQRLAEQDPLTGIANRQGFQ-ALLNA-RLAENEGRGVALGHLDLDNFRHV 167
            + ER      + RLA  D LT + NR  FQ  L NA + AE +   V L  LDLD F+ +
Sbjct: 827  ISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPI 886

Query: 168  NDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDA----NRAEWIAE 223
            ND+LGH +GDR++  +  RL   ++  D +AR+G DEF LL+  R       NRA  +AE
Sbjct: 887  NDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAE 946

Query: 224  RIVEALAEPYWIDGESLLLGCSLGIAHARAQSGAD--PLMWHAHIAMRQAKGSQGCTFHV 281
             I+ +L  P+ ++     +  S+GIA +  Q G++   LM +A  AM  AK      F  
Sbjct: 947  NILGSLVRPFVLENREFFVTASIGIALS-PQDGSELSQLMKNADTAMYHAKERGKNNFQF 1005

Query: 282  FNERINRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLL 341
            +   +N +A    +LES+LR A+ ++E  L+YQP+ +    R+ G EAL+RWRH  RGL+
Sbjct: 1006 YQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLV 1065

Query: 342  PPSEFVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLAT 401
            PP +F+P+ E+ GL+V +G WV+  A R ++A  +  +    ++VN+S RQF D QL   
Sbjct: 1066 PPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTR 1125

Query: 402  LSRLILEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHL 461
            ++ ++ E G+    LE ELTE+ +MR      Q + +L  LG+  ++DDFGTG+SS  +L
Sbjct: 1126 IANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYL 1185

Query: 462  NSLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFG 521
               PI +LK+DR+FV  +   E++ ++  A+I +AH+LNL V+AEGVE+ EQL  LR  G
Sbjct: 1186 KQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHG 1245

Query: 522  CDQVQGFLVSRPLPIGELMA 541
            CD+VQG+L  RP+P  +  A
Sbjct: 1246 CDEVQGYLFGRPMPAHQFEA 1265