Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 118/463 (25%), Positives = 193/463 (41%), Gaps = 50/463 (10%)

Query: 12  LLRLAGPLIASQLAHMLMVLTDTLMMAR-ISPQALAGGGLGAASYSFVSIFCLGVIAAVG 70
           LL  A P +AS +   L    + + + R + PQALA      A+ + +      V+   G
Sbjct: 20  LLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAA----TANANIIMFLMFSVVFGFG 75

Query: 71  ----TLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLL-LFGQKPENVA 125
                ++A   GA D++ A R   + +   + LA+  A+  W   P LL L    PE   
Sbjct: 76  MASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLATPPEAFD 135

Query: 126 SAAEFLTLLPLALPG-YLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFG 184
            A  +L ++ +A+P   L+ M + G        TP ++  +    ++ + N  LI G+  
Sbjct: 136 MALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTP-LIFMILSVAIDLVLNPVLILGLGP 194

Query: 185 LPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRK---GLSRPSLAALRELWRL 241
           +P +G+ G    TA    G  + +AL I  +       LR    G  RP++  +R L   
Sbjct: 195 IPAMGIGGSAAATAAA--GFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEMRVLSTK 252

Query: 242 GLPIGGTYMVEVGLFAFAALCMGVL---GSTELAAHQIALQIVSTAFMVPTGLSYAVTMR 298
           GLP+G   +V   +     + +G++   G    AA+  A QI +   M    +  AV+  
Sbjct: 253 GLPMGLQMIV---MSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAVSAM 309

Query: 299 VGLYYGAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQV 358
                GAG           GI +   I  A   + L+  EAL+ LF+  N     A+   
Sbjct: 310 AAQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQ----AVIDA 365

Query: 359 AVQLLMVAAWFELFDGMQTIAMGSIRG--------LKDAKTTFLIGLVCYWL----VGAP 406
           A  + ++A+W  +  G   I  G +R         L    T F + L  Y+L    +GA 
Sbjct: 366 AWNMQLLASWSFMLFGCTMILFGVMRANGVVVAPLLILVFTLFAVRLGFYYLAYPRIGAD 425

Query: 407 SAWLFTFTLGGGAVGIWWGLALGLACAAVALTFGFEWRMKRLL 449
           + WL +F +G          A+ L  AA+    G  WR  +L+
Sbjct: 426 ALWL-SFPVGS---------AVSLTLAALVYWQG-GWRKAKLM 457