Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 457 a.a., putative efflux protein, MATE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  222 bits (565), Expect = 2e-62
 Identities = 139/445 (31%), Positives = 221/445 (49%), Gaps = 5/445 (1%)

Query: 15  LAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIAAVGTLVA 74
           LA P++ SQL  +L+ + D++M+ R+  + LA   L  + +  V +F  GV  A+  LVA
Sbjct: 18  LAYPVMLSQLGQVLVGVADSMMVGRLGAEPLAAASLANSIFFVVMMFGTGVSMAITPLVA 77

Query: 75  IRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVASAAEFLTLL 134
              G       TR+  +G  +     +   LV+    P+L    Q    V  A  FL ++
Sbjct: 78  AADGEGKPRKITRVFNHGFAINGFTGVILFLVIVLASPLLGHMKQPAGVVEQAIPFLGVI 137

Query: 135 PLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFGLPKLGLMGIG 194
            L+L   + F   R F   L  +   M+I++F  ++N   N  LI G  G   +GL G G
Sbjct: 138 TLSLIPLMFFQTFRQFAEGLSHTKEAMLITIFCNLVNVFLNWVLIYGHLGFAPMGLNGAG 197

Query: 195 LVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLPIGGTYMVEVG 254
             T +  + MA  +  +I   P +  Y L+    +       +L ++G+P G  ++ EVG
Sbjct: 198 WATLISRVLMAIIMGYFIWKSPLFRKYQLKLDFRKLYFPMFSKLLKIGVPTGFQFIFEVG 257

Query: 255 LFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAGNLLAARSA 314
            F+ AA+ MG +G   LAAHQIA+ + S ++M+ +GLS A  +RVG   G  ++   R A
Sbjct: 258 AFSTAAIMMGWIGVNALAAHQIAINLASISYMMASGLSAAAMVRVGNQLGKNDIKTLREA 317

Query: 315 GRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQLLMVAAWFELFDG 374
           G    G  A  M  FA +F+   + L  L+I   DP    + ++   LL++A  F+L DG
Sbjct: 318 GFTAFGMIAGFMLLFAGVFIAFKDHLPLLYI--GDP---EVVEMTAGLLVIAGLFQLSDG 372

Query: 375 MQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFTLGGGAVGIWWGLALGLACAA 434
           +Q + +G++RG+ D K   LI LV YW++  P  ++  F  G    G+W+GL +GL    
Sbjct: 373 IQVVGLGALRGMADVKMPTLITLVAYWVIALPLGYMLAFHWGAEEKGVWYGLLIGLTITG 432

Query: 435 VALTFGFEWRMKRLLGKAGVRTEAA 459
             L   F+    RLL +   R + A
Sbjct: 433 GLLLVRFQQLSLRLLSQKHQRLKVA 457



 Score = 34.7 bits (78), Expect = 7e-06
 Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 20/214 (9%)

Query: 239 WRLGLPIGGTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMR 298
           + L  P+  + + +V +    ++ +G LG+  LAA  +A  I     M  TG+S A+T  
Sbjct: 16  FHLAYPVMLSQLGQVLVGVADSMMVGRLGAEPLAAASLANSIFFVVMMFGTGVSMAITPL 75

Query: 299 VGLYYGAG---NLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAI 355
           V    G G    +    + G    GF  +I+F    L ++L   L+G           AI
Sbjct: 76  VAAADGEGKPRKITRVFNHGFAINGFTGVILF----LVIVLASPLLGHMKQPAGVVEQAI 131

Query: 356 -FQVAVQLLMVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFT 414
            F   + L ++   F  F   +  A     GL   K   LI + C  LV     W+  + 
Sbjct: 132 PFLGVITLSLIPLMF--FQTFRQFA----EGLSHTKEAMLITIFCN-LVNVFLNWVLIYG 184

Query: 415 LGG----GAVGIWWGLALGLACAAVALTFGFEWR 444
             G    G  G  W   +     A+ + + F W+
Sbjct: 185 HLGFAPMGLNGAGWATLISRVLMAIIMGY-FIWK 217