Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (352), Expect = 5e-38
 Identities = 98/276 (35%), Positives = 144/276 (52%), Gaps = 9/276 (3%)

Query: 3   RQLPPLYALRAFEAAARLSSFTRAGEELSITQSAISRHIRTLEEHFACRLFVRSGRSLQL 62
           R LP + AL+ FEAA R  SFTRA EEL++TQSA+S+ +  LEE     LF R  R LQ+
Sbjct: 5   RHLPSITALQCFEAATRHLSFTRAAEELNLTQSAVSKQVAQLEELLQHLLFRRVRRRLQM 64

Query: 63  TEAGRVLLPGVREGFAAFERACETL---CGEDDILRMKAPSTLTMRWLLACLSRFRHLQP 119
           T AG + L  VR+     E +   L    GE ++LR+  P T   RWL+  L  +R   P
Sbjct: 65  TPAGDLYLVEVRKILTQVEMSTHYLRSYGGETEVLRVSTPYTFGARWLVPRLKGWRLRHP 124

Query: 120 GNEVQLTSAWMDVDHVDFNQEPFDCAVLLSDGVFPPEWEVRKLFPELLIPVGAPDLLDEE 179
              + L +   + +  +  Q   D A     G   P  E +KLF E L+PV AP+ L  +
Sbjct: 125 QIHLDLCN---EQEPDELLQGKADMAFYFGQG-SRPGTESQKLFSEELVPVCAPESLPAQ 180

Query: 180 PWDV-CRLASVELLHPTVDKRDWREWLERMGLGDQVSLKGGQVFDTLELGMIAAARGYGI 238
           P+    +L+++ LL      + W +W    G   + S  G + FDT  + + AA  G G+
Sbjct: 181 PFTAPTQLSNLVLLQNASRPQGWHDWFASQGYQTEHSYHGPR-FDTFYMCIRAAQVGCGV 239

Query: 239 SMGDLLMVAEDVAQKRLSLPWPTAVPSGMDYYLVWP 274
           ++    +V E++A  +L +PW  A+PS   YYL +P
Sbjct: 240 ALLPRFLVEEELADGKLVIPWQHAMPSEDAYYLAYP 275