Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 316 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (298), Expect = 9e-32
 Identities = 96/294 (32%), Positives = 139/294 (47%), Gaps = 13/294 (4%)

Query: 11  LRAFEAAARLSSFTRAGEELSITQSAISRHIRTLEEHFACRLFVRSGRSLQLTEAGRVLL 70
           LRAFEAAAR  SFT A  EL  TQ AIS+ I+ LEE  A RLF R  R ++LT+AG +L 
Sbjct: 13  LRAFEAAARHRSFTAAAMELGTTQPAISQQIKRLEEQLAIRLFDRIYRGIELTDAGALLF 72

Query: 71  PGVREGFAAFERACETLCGED--DILRMKAPSTLTMRWLLACLSRFRHLQPGNEVQLTSA 128
             V+ G     +    +  +D  ++L++         WL+  L RF    P  +V L ++
Sbjct: 73  EHVQGGLQGINQGLSLITQQDQHEVLQVATDFAFAAYWLMPRLHRFHKANPQVDVSLVTS 132

Query: 129 WMDVDHVDFNQEPFDCAVLLSDGVFPPEWEVRKLFPELLIPVGAPDLLDEE--PWDVCRL 186
             + +H     +  D AVL  DG F  + +   LF E + PV +P  L ++  P  V  L
Sbjct: 133 --ERNHATLRSD-IDVAVLFGDGRF-KQGDSLWLFNEEVFPVCSPQWLKDQTTPLTVQNL 188

Query: 187 ASVELLHPTVDKR----DWREWLERMGLGDQVSLKGGQVFDTLELGMIAAARGYGISMGD 242
               LLH   +      DW      +G+       G   FD   L + AA  G G+++G 
Sbjct: 189 HDFPLLHLRQENNSQWFDWSGVFRELGIA-SAPTPGQLRFDNYTLLIQAAIAGQGVAIGW 247

Query: 243 LLMVAEDVAQKRLSLPWPTAVPSGMDYYLVWPRTRRGGERLRRLSAFLEGEVAA 296
             +V   + Q  L  P    V S   YY+V P+ +R G+ + R   +L  E A+
Sbjct: 248 RHLVDNLLEQGWLCRPLSDTVISRFGYYVVQPQRKRRGQLVERFVEWLVAEQAS 301