Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  118 bits (296), Expect = 1e-31
 Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 3   RQLPPLYALRAFEAAARLSSFTRAGEELSITQSAISRHIRTLEEHFACRLFVRSGRSLQL 62
           R +P   AL+ FEAAAR  SFTRA +EL +TQSA+S+ +  LE+  +  LF R  R L L
Sbjct: 4   RLMPSTTALQCFEAAARHLSFTRAAQELHLTQSAVSKQVAQLEDMLSHSLFQRIRRRLHL 63

Query: 63  TEAGRVLLPGVREGFAAFERACETLCG---EDDILRMKAPSTLTMRWLLACLSRFRHLQP 119
           T AG + L  V +     + +   +     E ++LR+    T   RWL+  L  F    P
Sbjct: 64  TPAGALYLTEVNKILTQIDISSRYILSYGDETEVLRIATQPTFGARWLVPRLKGFGDRYP 123

Query: 120 GNEVQLTSAWMDVDHVDFNQEPFDCAVLLSDGVFPPEWEVRKLFPELLIPVGAPDLLDEE 179
              + + +   +++  D  Q   D A     G +P    + +LF E ++PV +P LL   
Sbjct: 124 RIHLDVRN---ELEPFDLVQAKADVAFFFGQGTWPGATCI-ELFSEEVVPVCSPQLLASH 179

Query: 180 PWDVCRLASVELLHPTVDKRD-WREWLERMGLGDQVSLKGGQVFDTLELGMIAAARGYGI 238
            +D  +  +   L   V + + W EW   +GL  Q S  G + FDT  L + AA  G GI
Sbjct: 180 RFDSAQALTEHRLLQCVSRPEAWHEWFLGLGLHSQNSYHGPR-FDTFYLCIRAAISGCGI 238

Query: 239 SMGDLLMVAEDVAQKRLSLPWPTAVPSGMDYYLVWPRTRRGGERLRRLSAFLEGEVAAMD 298
           ++    +VAE++++ +L + W   V S   +++          ++R    ++   VA  D
Sbjct: 239 ALIPRYLVAEELSEGKLVVAWDHPVASNGRHFIAHAEHAAEVPKIRAFVQWIRERVAEGD 298