Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  186 bits (471), Expect = 7e-52
 Identities = 114/293 (38%), Positives = 159/293 (54%), Gaps = 8/293 (2%)

Query: 2   SKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRRL 61
           S+R +PSM  L+  EA+AR  SFT AA EL+LTQSAVS+Q+  LE++L   LF+R R  +
Sbjct: 4   SRRFLPSMALLRALEASARLQSFTAAAAELNLTQSAVSRQIRALEELLGGDLFVRERHAV 63

Query: 62  QLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGKR 121
           +LT AG  Y  EV + L ++  ++            L +A  P+FG RWL P L  F   
Sbjct: 64  RLTQAGEAYAQEVREALGRIS-TATLGFRANPSGGTLNLAILPTFGTRWLAPRLPDFVAE 122

Query: 122 HGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRKL 181
           H  I +++   + PF       D    +GQ  W GA    L  E VVP C+ +L   R+L
Sbjct: 123 HPGITINLVTRLAPFDFRMEQIDAAVHFGQPDWLGAELDFLMSETVVPACSRKL---REL 179

Query: 182 AGAE---ELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGV 238
            G E   +L +  LL   SRP+AW +WF      SV    G   D F MA  AA AG G+
Sbjct: 180 HGFETPTDLLKAPLLHLVSRPQAWKQWFAAM-RTSVDQVPGMLVDQFAMAAQAAMAGLGI 238

Query: 239 ALVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWIG 291
           AL+P++L  +ELA G LV   +  ++SA ++YLA+     + P +R+   WIG
Sbjct: 239 ALLPKFLIEQELARGDLVEALDGPVQSADSYYLAWPSGRGDYPPLRSFRRWIG 291