Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 294 a.a., putative Transcriptional regulator AmpR from Pseudomonas putida KT2440

 Score =  153 bits (386), Expect = 5e-42
 Identities = 102/292 (34%), Positives = 144/292 (49%), Gaps = 6/292 (2%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           M+++ +P +  L+ FE +AR+L+FT AAEELHLTQ AVS+Q+  LE  L   LF R+ R 
Sbjct: 1   MTQKTLPPLNWLRAFEVSARYLNFTHAAEELHLTQGAVSQQIRHLESQLGVALFKRLPRG 60

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGE-QTEILKVATQPSFGVRWLIPHLKGFG 119
           L LT  G  YL  V   ++++ + +  +  +G+ Q   LKV    SF   WL P L  F 
Sbjct: 61  LGLTEEGQSYLPVVQDAISRLAVGTNEI--FGQRQRRPLKVRGSLSFLHFWLAPRLADFR 118

Query: 120 KRHGNIHLDIRNEMEPFAL-LQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAG 178
           + H  +  DIR     +   L    D+   +G G W G     L R+ +VPVCAP LLAG
Sbjct: 119 RSHPQV--DIRYISNLWVKELDAEDDLEIRWGSGQWAGVEAQRLTRDMLVPVCAPALLAG 176

Query: 179 RKLAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGV 238
             L    +LA + LL      E W  W        V +  G +FDT    L  A+ G GV
Sbjct: 177 CPLREPRDLARVPLLHVLGYEEGWGYWLERVGADQVDSSSGLQFDTLVSTLRMAELGLGV 236

Query: 239 ALVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           AL    L    L +G LV P+   + ++ + +L      A  P  +A   W+
Sbjct: 237 ALARSSLVEDLLQEGRLVAPFAQRIEASESFFLVRGLGEALSPDAQAFSHWL 288