Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  213 bits (541), Expect = 6e-60
 Identities = 114/293 (38%), Positives = 165/293 (56%), Gaps = 1/293 (0%)

Query: 3   KRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRRLQ 62
           +R +PS  AL CFEAAAR+ SFT+AA+EL LTQ AV +Q+  LE  L   LF R RR ++
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 63  LTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGKRH 122
           LT AG  Y  +V   L  V+  +  V+   +   ++++A  P+FG +WL+P LK F +RH
Sbjct: 62  LTEAGLSYSRQVAAQLDAVERDTLSVMRQ-QGANVIELAVVPTFGTQWLLPRLKDFQQRH 120

Query: 123 GNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRKLA 182
             + +++ N   PF     + D   ++G   W G    +L  E  VPVC+P LL G+ + 
Sbjct: 121 PEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGML 180

Query: 183 GAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVALVP 242
            A  +A+L LLQ ++RP AW +WF    +       GPR++ F M   AA    G+AL+P
Sbjct: 181 EARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALIP 240

Query: 243 RYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWIGEQLQ 295
            +L  +EL +G LVV   HA+ S  A+YL   E   E   +RA  +W+  Q Q
Sbjct: 241 PFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQAQ 293