Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., LysR substrate-binding domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  156 bits (394), Expect = 6e-43
 Identities = 103/295 (34%), Positives = 144/295 (48%), Gaps = 19/295 (6%)

Query: 4   RLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRRLQL 63
           R +P + ALQ FE  ARH SFTRAAE L LTQ AVS+Q+  LED  +  LF R  + L L
Sbjct: 2   RRLPPLNALQIFETVARHRSFTRAAEHLCLTQGAVSRQILALEDYYQFPLFKRHAKGLTL 61

Query: 64  TPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGKRHG 123
           T  G L L  V +   +++  S   LT       LKV   P+  +RW++P +  F   + 
Sbjct: 62  TAEGELLLPAVKESFARIEEISLR-LTRQRTDLALKV---PTCVMRWMLPKIMQFQADYP 117

Query: 124 NIHL--------DIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPEL 175
           ++H+        D+  ++EPF       D    YG         V LF E + PVCAP+L
Sbjct: 118 DLHVQITTTWQHDVDFQVEPF-------DAAIVYGTSAGADVQAVPLFEERLTPVCAPQL 170

Query: 176 LAGRKLAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAG 235
           L  + L  A +L+   LL  T     W  W    D + V A  GP FDT  +A +AA  G
Sbjct: 171 LQDKPLVKAADLSRHTLLHPTRDHRDWKMWLDHVDARDVDANLGPSFDTLDLATNAALQG 230

Query: 236 CGVALVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
            GVA+    L  +++A   LV P++  + +   +Y  Y +  A   KV    +WI
Sbjct: 231 FGVAISDLALIEEDVAAQRLVRPFDTVLTTGARYYFVYPDSVAHQQKVNLFRDWI 285