Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional regulator GcvA from Serratia liquefaciens MT49

 Score =  187 bits (475), Expect = 3e-52
 Identities = 115/291 (39%), Positives = 158/291 (54%), Gaps = 4/291 (1%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           MSKRL P + AL+ F+AAARHLSFT+AAEEL +TQ+AVS Q+  LED L   LF R  R 
Sbjct: 1   MSKRL-PPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRS 59

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120
           L LT  G  Y  ++ +I + ++ ++R  L        L V+  PSF ++WL+P L GF  
Sbjct: 60  LLLTEEGQSYYLDIKEIFSSINEATR-KLQARSAKGALTVSLPPSFAIQWLVPRLSGFNS 118

Query: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAG-R 179
            +  I + I+        L    DV  FYG+G W G     L+ E ++PVC+P LL G  
Sbjct: 119 AYPGIDVRIQAVDREEDKLADDVDVAIFYGRGNWTGLRAERLYAEYLLPVCSPSLLTGEH 178

Query: 180 KLAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVA 239
            L    +LA   LL  TSR + W  +  +  LQ ++   GP F    M + AA  G G+A
Sbjct: 179 ALKMTSDLAYHTLLHDTSRRD-WLAYTRQLGLQHINVQQGPIFSHSAMVVQAAVHGQGIA 237

Query: 240 LVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           LV   +A  E+  G LV P+N  + S  A YL   +  AE+ K+ A  +WI
Sbjct: 238 LVNNVMAQTEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288