Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., Glycine cleavage system transcriptional activator GcvA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  191 bits (485), Expect = 2e-53
 Identities = 117/291 (40%), Positives = 159/291 (54%), Gaps = 4/291 (1%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           MSKRL P + AL+ F+AAARHLSFTRAAEEL +TQ+AVS Q+  LED L   LF R  R 
Sbjct: 1   MSKRL-PPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRS 59

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120
           L LT  G  Y  ++ +I +Q+  ++R  L        L V+  PSF ++WL+P L  F  
Sbjct: 60  LLLTEEGQSYFLDIKEIFSQLTEATR-KLQARSAKGALTVSLPPSFAIQWLVPRLSSFNS 118

Query: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRK 180
            +  I + I+        L    DV  FYG+G WPG    +L+ E ++PVC+P LL G K
Sbjct: 119 AYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEK 178

Query: 181 -LAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVA 239
            L   E+LA+  LL   SR + W  +  +  L  ++   GP F    M L AA  G G+A
Sbjct: 179 PLKTPEDLAKHTLLHDASRRD-WQAYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGIA 237

Query: 240 LVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           L    +A  E+  G LV P+N  + S  A YL   +  AE+ K+ A  +WI
Sbjct: 238 LANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288