Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional regulator GcvA from Erwinia tracheiphila SCR3

 Score =  183 bits (464), Expect = 5e-51
 Identities = 112/291 (38%), Positives = 156/291 (53%), Gaps = 4/291 (1%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           MSKRL P + AL+ F+AAARHLSFT+AAEEL +TQ+AVS Q+  LED L   LF R  R 
Sbjct: 1   MSKRL-PPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRS 59

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120
           L L+  G  Y  ++ +I + ++ ++R  L        L V+  PSF ++WL+P L  F  
Sbjct: 60  LLLSEEGQSYYLDIKEIFSALNDATR-KLQARSAKGALTVSLLPSFAIQWLVPRLSSFNS 118

Query: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAG-R 179
            +  I + I+      A L    DV  FYG+G WPG    +L+ E ++PVC+P LL G  
Sbjct: 119 AYPGIDVRIQAVDRDEAKLSDDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGDN 178

Query: 180 KLAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVA 239
            +   ++LA   LL   SR   W  +  +  +  ++  HGP F    M L AA  G GVA
Sbjct: 179 PIKSPQDLASHTLLHDASR-RNWQSYTRQLGVAHINVQHGPIFSHSAMVLQAAIHGQGVA 237

Query: 240 LVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           L    +A  E+  G L  P+N  + S  A YL   +  AE+ K+ A   WI
Sbjct: 238 LANNVMAQTEVEAGRLACPFNDVLVSKNAFYLVCHDSQAELGKIAAFRRWI 288