Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 308 a.a., transcriptional regulator GcvA from Dickeya dianthicola ME23

 Score =  183 bits (464), Expect = 5e-51
 Identities = 114/291 (39%), Positives = 155/291 (53%), Gaps = 4/291 (1%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           MSKRL P + AL+ F+AAARHLSFTRAAEEL +TQ+AVS Q+  LED L   LF R  R 
Sbjct: 1   MSKRL-PPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRS 59

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120
           L LT  G  Y  ++ +I + ++ ++R  L        L V+  PSF + WL+P L  F  
Sbjct: 60  LLLTEEGQSYFLDIKEIFSALNEATR-KLQARSAKGALTVSLLPSFAIHWLVPRLSSFNT 118

Query: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAG-R 179
            +  I + I+        L    DV  FYG+G WPG    +L+ E ++PVCAP+LL G  
Sbjct: 119 EYPGIDVRIQAVDREEERLSDDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCAPQLLTGEH 178

Query: 180 KLAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVA 239
            L    +L    LL   SR + W  +  +  +  ++   GP F    M L AA  G GVA
Sbjct: 179 PLKTPADLIWHTLLHDASRRD-WMAYTRQLGIAQINVQQGPIFSHSAMVLQAAIHGQGVA 237

Query: 240 LVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           L    +A  E+  G LV P+N  + S  A YL   +  AE+ K+ A  +WI
Sbjct: 238 LANNVMAQTEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288