Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., glycine cleavage system transcriptional activator; autorepressor from Escherichia coli BL21

 Score =  191 bits (484), Expect = 2e-53
 Identities = 118/291 (40%), Positives = 158/291 (54%), Gaps = 4/291 (1%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           MSKRL P + AL+ F+AAARHLSFTRAAEEL +TQ+AVS Q+  LED L   LF R  R 
Sbjct: 1   MSKRL-PPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRS 59

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120
           L LT  G  Y  ++ +I +Q+  ++R  L        L V+  PSF + WL+P L  F  
Sbjct: 60  LLLTEEGQSYFLDIKEIFSQLTEATR-KLQARSAKGALTVSLLPSFAIHWLVPRLSSFNS 118

Query: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRK 180
            +  I + I+        L    DV  FYG+G WPG    +L+ E ++PVC+P LL G K
Sbjct: 119 AYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEK 178

Query: 181 -LAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVA 239
            L   E+LA+  LL   SR + W  +  +  L  ++   GP F    M L AA  G GVA
Sbjct: 179 PLKTPEDLAKHTLLHDASRRD-WQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVA 237

Query: 240 LVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           L    +A  E+  G LV P+N  + S  A YL   +  AE+ K+ A  +WI
Sbjct: 238 LANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288