Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 300 a.a., Gcv operon activator from Alteromonas macleodii MIT1002

 Score =  185 bits (469), Expect = 1e-51
 Identities = 112/288 (38%), Positives = 152/288 (52%), Gaps = 3/288 (1%)

Query: 4   RLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRRLQL 63
           R +P + AL+ FEAAARHLSFT+AA+EL +TQ+AVS Q+  LED L   LFLR  R L L
Sbjct: 3   RRLPPLNALKSFEAAARHLSFTKAADELFVTQAAVSHQIKALEDFLSMKLFLRRNRTLLL 62

Query: 64  TPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGKRHG 123
           T  G  Y  E+  I   +  ++  +L  G +  I  VA  PSF  +WL+P +  F   H 
Sbjct: 63  TEEGQAYFLELKDIFKNLQDATERLLAKGSKGAI-TVAMPPSFASQWLVPRIHKFSLAHP 121

Query: 124 NIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRK-LA 182
           +I + I+        L+   DV  +YG+G W G    +L RE + P+C+P L  G K L+
Sbjct: 122 DIDVRIKAVDFDEGFLEDDVDVAIYYGKGRWAGLQADQLHREFLTPLCSPMLFQGPKPLS 181

Query: 183 GAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVALVP 242
              +L   VLL   SR  AW  W     +  V+   GP F    + L AA  G G+AL  
Sbjct: 182 SLSDLRHHVLLHDLSR-TAWKNWLKHVGVVGVNVNQGPVFSHSMLVLQAAALGQGIALGN 240

Query: 243 RYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
             LA  E+  G LV+P+   + S  A YL   E  AE+ K+ A  +WI
Sbjct: 241 TVLARPEIEAGRLVMPFEERVESRDAFYLVCEESQAELGKIAAFRDWI 288