Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  249 bits (637), Expect = 9e-71
 Identities = 156/426 (36%), Positives = 222/426 (52%), Gaps = 32/426 (7%)

Query: 14  ATLALWPALSHAEAPGWSLLSRNYFLHSDFR----SPSGSGQNYRQEWAQGFIGEVRSGF 69
           A  A  P     E    ++L+RN++ + D R    SP+G+G  Y + WAQG IG   SGF
Sbjct: 20  AVAAQDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPTGNG--YSEAWAQGLIGRFESGF 77

Query: 70  TEGTVGVGIDAHGFLGLKLDGGRGHSGT----GLLPRDSDGRAESEYSSAGAALKMQLGN 125
           T+GTVG G+DA   +G+KLD G G SG     G+LP DS    E  YS  G A K+++ +
Sbjct: 78  TQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKVGGAAKLRVLD 137

Query: 126 TQLRYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHD 185
           T ++ G++   TPV   GD R+ PE   G   +NT      LQ GR T  +    S    
Sbjct: 138 TVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMSQPAQSGMDK 197

Query: 186 DFSG-YGATTHNRAISLAGATFAPNGPFGAALYAGQLENTWRQAYLNLNLAQGNWRL--- 241
            F+  Y     +  I   G  +  N     +LY+ +L++ W Q Y     +   + L   
Sbjct: 198 GFATFYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAWDQYYFG---SAARYPLNDE 254

Query: 242 -----DGNLYKTRDTGNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVG-G 295
                D N YK  D G    GA D   +S       GA +L+V++Q+  GD  FD++   
Sbjct: 255 VSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDDDFDYLRQS 314

Query: 296 DSIYLANAIKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGA 355
           DSI+L N+I+Y+DFN P E SW +RYDL+    G PGLS M RY  G G D S+A A   
Sbjct: 315 DSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGADYSNANA--V 372

Query: 356 YVNQYGDGG-----KHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYL 410
           Y+ + G G      + WERDI+  YVVQ+G  KDLSL     + R++  ++  D++ + +
Sbjct: 373 YMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFES--DLEEVRV 430

Query: 411 IIEYPL 416
           I+EYP+
Sbjct: 431 IVEYPI 436