Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 430 a.a., porin from Pseudomonas simiae WCS417

 Score =  243 bits (619), Expect = 1e-68
 Identities = 144/416 (34%), Positives = 220/416 (52%), Gaps = 25/416 (6%)

Query: 11  ALLATLALWPALSHA---EAPGWSLLSRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRS 67
           A  ATLA +  LS A   E    +L +RN + + DFR  + + Q+ R EWAQGF+  ++S
Sbjct: 23  ASAATLAGFSPLSQAAFFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLNLQS 82

Query: 68  GFTEGTVGVGIDAHGFLGLKLDGGRGHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQ 127
           G+T+GTVG G+DA G LG+KLD     +GTGLLP   DGRA  EYS  G   K+++  T+
Sbjct: 83  GYTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTGKVKISATE 142

Query: 128 LRYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHD-- 185
           L+ G ++ E P+    D R+ P+   G  + + +  +     GR     ++D+++  D  
Sbjct: 143 LKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIA 202

Query: 186 ---DFSGYGATTHNRAISLAGATFAPNGPFGAALYAGQLENTWRQAYLNL----NLAQGN 238
                S + +    +  +  GA +        + +  QL++ +RQ +L L     +  G 
Sbjct: 203 LNNKNSRFVSGATGKHFNFGGADYQFADKITGSYHFAQLDDVYRQHFLGLVASRPMGPGT 262

Query: 239 WRLDGNLYKTRDTGNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVGGDSI 298
           +  D  L  + DTG A  G ID  + + L  Y+     LS  YQ + GD+ F +V G   
Sbjct: 263 FGTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDGSDP 322

Query: 299 YLANAIKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVN 358
           YL N ++  DF G  E SWQ RYD +FA LG PGLS M RY+SG  I   +         
Sbjct: 323 YLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKN--------- 373

Query: 359 QYGDGGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYLIIEY 414
             G+ GK WER+ ++KYVVQ+G  KD+++   + ++R+N   +  D D + L++ Y
Sbjct: 374 --GETGKEWERNSEIKYVVQTGTFKDVAVRLRNATYRSN--YSARDADEMRLLVSY 425