Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  216 bits (549), Expect = 1e-60
 Identities = 140/401 (34%), Positives = 205/401 (51%), Gaps = 28/401 (6%)

Query: 31  SLLSRNYFLHSDFRSPSG-SGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLGLKLD 89
           +L +RNYF   D+    G S Q+  QEWAQGFI    SG+T+GT+GVG+D  G LG KLD
Sbjct: 42  TLQARNYFFSRDYADIKGASTQSRTQEWAQGFILNASSGYTQGTLGVGVDVTGLLGFKLD 101

Query: 90  GGRGHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVFDTGDKRLHP 149
               H+ +GLLP    G++  EYS  GAA+K ++  T+L+ GE+M   PV    D RL P
Sbjct: 102 SSPEHARSGLLPSLDSGKSADEYSRLGAAIKFKVSQTELKVGELMPNLPVLLFSDLRLLP 161

Query: 150 EYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDFSGYG--------ATTHNRAISL 201
               G  +E+ +     L AG+F + + +D+S++   ++           A   +   + 
Sbjct: 162 PTYQGAMLESREFAGLTLSAGQFRSTSLRDSSNSQKMYALVNDPINPARLARFTSDRFNY 221

Query: 202 AGATFAPN-GPFGAALYAGQLENTWRQAYLNLNLAQ--GNWRLDGN--LYKTRDTGNASA 256
            GA +A N       ++  QLE+ ++Q + +   A+  G+W L  N   +  R+ G+  A
Sbjct: 222 VGADYAFNDNRTSVGVWQAQLEDIYQQRFYSFKHAEPLGSWTLGVNAGYFDAREDGSKVA 281

Query: 257 GAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVGGDSIYLANAIKYADFNGPGEHS 316
           G  D  A   L     G     V YQ++ GD  F  VG ++  + N +   +F+ PGE S
Sbjct: 282 GDYDNHALFSLFSAKTGGHTFYVGYQQIGGDDGFIQVGANTNPMGNTLPTYEFSAPGERS 341

Query: 317 WQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGKHWERDIDLKYV 376
           WQ+R+D NF  LG PGL+   RYV GR ++              G  G+  ERD+DL YV
Sbjct: 342 WQVRHDYNFVALGLPGLTSTLRYVKGRDVE-----------TGLGFEGRDRERDLDLAYV 390

Query: 377 VQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYLIIEYPLK 417
           VQSG    L +   +V  R+N      DID   LI+ Y +K
Sbjct: 391 VQSGPLAGLGIRVRNVMARSNYR---TDIDENRLILSYTIK 428