Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  217 bits (552), Expect = 6e-61
 Identities = 141/393 (35%), Positives = 205/393 (52%), Gaps = 25/393 (6%)

Query: 32  LLSRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLGLKLDGG 91
           L  RNY+ + DFR P G+ +   +EWAQGFI +  SG+T G +G G+D     G+KLD G
Sbjct: 40  LTLRNYYFNRDFRDP-GAAKGKVEEWAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSG 98

Query: 92  RGHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVFDTGDKRLHPEY 151
            G SG+ LLP   DGRA  +Y  AG A K+++  T+L+ GE++ + P+    D RL P+ 
Sbjct: 99  GGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQT 158

Query: 152 ATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDFSGYGATTHNRAISLAGATFAPNGP 211
             G  +++ +     LQAG++   + + +S   D  +       +   + AGA +  N  
Sbjct: 159 FRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLSAWAAPGVTSDGFNYAGAEYRFNQQ 218

Query: 212 ---FGAALYAGQLENTWRQAYLNLNLAQ--GNWRLDGNL--YKTRDTGNASAGAIDTLAY 264
               GA  +  QLE+ ++Q+Y NL  +Q  G W L  NL  +  RD G A  G I +   
Sbjct: 219 RTLIGA--WHSQLEDIYQQSYFNLLHSQRVGEWTLGANLGYFIDRDDGQARIGDIQSRTG 276

Query: 265 SLLAKYSFGAQALSVAYQKVEGDTPFDFVGGDS-IYLANAIKYADFNGPGEHSWQLRYDL 323
             L   S     L +  QKV GD+ +  V G S   L N +   +F+   E SWQ+RYD 
Sbjct: 277 YALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDY 336

Query: 324 NFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGKHWERDIDLKYVVQSGAAK 383
           NFA LG PGL  M RY  G G + + A          G  GK WERD ++ Y  QSGA K
Sbjct: 337 NFAALGVPGLLAMVRY--GHGENATTAA---------GSNGKEWERDAEVNYTFQSGALK 385

Query: 384 DLSLSFSHVSHRANQAQAGDDIDRIYLIIEYPL 416
           +L++    +++  N+     D+D+  LI+ YPL
Sbjct: 386 NLNI---RLNNATNRRSFNSDLDQTRLIVSYPL 415