Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  209 bits (531), Expect = 2e-58
 Identities = 137/402 (34%), Positives = 199/402 (49%), Gaps = 10/402 (2%)

Query: 11  ALLATLALWPALSHAEAPGW--SLLSRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSG 68
           A  ATL + P  S A    +  SL  RN++ + DFR+  G+ Q+ R EWAQGFI  ++SG
Sbjct: 10  ACSATLLVAPYASAAFVEDFKGSLELRNFYYNRDFRN-DGATQSKRDEWAQGFILNLQSG 68

Query: 69  FTEGTVGVGIDAHGFLGLKLDGGRGHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQL 128
           FTEG VG GIDA G LG+KLD     +G+GLL  DSD + E EY    A  K ++G T+L
Sbjct: 69  FTEGPVGFGIDAMGLLGVKLDSSPDRTGSGLLAYDSDRQVEDEYGKFVATAKARMGKTEL 128

Query: 129 RYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDFS 188
           R G +    P+  + + RL P+   G  +   D     + A R  A   Q NS+  +  +
Sbjct: 129 RIGGVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTATRINAV-KQRNSTDFESLT 187

Query: 189 GYG-ATTHNRAISLAGATFAPNGPFGAALYAGQLENTWRQAYLNLN----LAQGNWRLDG 243
             G A       +     F P      +L+A +LE+ ++  +  +     L +GN   D 
Sbjct: 188 ATGYAPVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYKSYFAGIKVIKPLWEGNVIADV 247

Query: 244 NLYKTRDTGNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVGGDSIYLANA 303
            ++   +TG+   G +D    S    YS     +   YQK  GDT F FV G   YL   
Sbjct: 248 RVFDASETGSKKLGEVDNRTLSSYFAYSIKGHTIGGGYQKAWGDTSFAFVNGTDTYLFGE 307

Query: 304 IKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPA-GGAYVNQYGD 362
              + F  P E  W  RYD +FA LG PGL    RY+ G  ++     +   A +   G+
Sbjct: 308 SLVSTFTAPEERVWFARYDFDFAALGVPGLLFTTRYMKGDDVNPDLLTSRQAASLRLNGE 367

Query: 363 GGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDD 404
            GK WER  D+ YV+QSG AK +S  + + ++R+  A + ++
Sbjct: 368 DGKEWERVTDISYVIQSGPAKGVSFQWRNSTNRSTYADSANE 409