Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  267 bits (682), Expect = 5e-76
 Identities = 164/413 (39%), Positives = 226/413 (54%), Gaps = 34/413 (8%)

Query: 31  SLLSRNYFLHSDFR-------SPSGSGQN-YRQEWAQGFIGEVRSGFTEGTVGVGIDAHG 82
           S+L+RN++ + D R       +PS    N Y + W    I    SGFT+GTVGVG+DA  
Sbjct: 39  SVLNRNFYFNRDNRDSVAPTHNPSKQADNGYSEAWGHAVITRFESGFTQGTVGVGLDAFA 98

Query: 83  FLGLKLD--GGR--GHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETP 138
            LGLKLD  GGR  G S   +LP D DG+A  EY+  G A K++L +T L+ G++    P
Sbjct: 99  MLGLKLDTGGGRNGGRSSFDVLPVDRDGQARDEYTKVGGAAKLRLFDTVLKVGDVFPANP 158

Query: 139 VFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDF-SGYGATTHNR 197
           V   GD RL PE   G  +EN+   D  LQAGR  A +   +S   ++F + YG    + 
Sbjct: 159 VVAAGDSRLLPESFRGVTLENSSIKDLTLQAGRLHAMSQPMSSDLRENFVTFYGGPVDSP 218

Query: 198 AISLAGATFAPNGPFGAALYAGQLENTWRQAYLNLNLAQGNWRLDG--------NLYKTR 249
            I+  G  +  N     +L++ +L++ W Q Y   +L+   W L          N YK  
Sbjct: 219 WIAYGGGDYRLNEHVSVSLFSSRLKDAWNQYYAGTSLS---WPLSEALALIGGFNYYKAV 275

Query: 250 DTGNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVG-GDSIYLANAIKYAD 308
           D G    GA D   +S      FGA  L++ +Q+  GD  FD++   DSI+L N+I+Y+D
Sbjct: 276 DEGQQRLGAFDNDIWSAKLGVRFGAHTLALTHQRNNGDDDFDYLRQSDSIFLDNSIQYSD 335

Query: 309 FNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGG---- 364
           FN P E SW LRYDLN A  G PGLS M RY  G+G D  ++ A   Y+ +   G     
Sbjct: 336 FNAPKERSWMLRYDLNMAAYGVPGLSFMTRY--GKGNDADYSNANATYMRRDVAGNPLTD 393

Query: 365 -KHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYLIIEYPL 416
            K WERDI++KYVVQ+GAAKDLSL     + RA   ++  D+D + +I+EYPL
Sbjct: 394 QKRWERDIEVKYVVQTGAAKDLSLRVRQATTRATAFES--DLDEVRMIVEYPL 444