Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  206 bits (523), Expect = 1e-57
 Identities = 144/420 (34%), Positives = 208/420 (49%), Gaps = 24/420 (5%)

Query: 5   THGPGRALLATLAL-WPALSHAEAPGWSLLS-RNYFLHSDFRSPSGSGQNYRQEWAQGFI 62
           TH    A LAT+AL  PAL+       + L  RN++++ DFR  S + Q   +EW QGF 
Sbjct: 11  THFLSAAWLATVALPMPALADFIGDSHARLELRNHYINRDFRQ-SNAPQAKAEEWGQGFT 69

Query: 63  GEVRSGFTEGTVGVGIDAHGFLGLKLDGGRGHSGTGLLPRDSDGRAE-SEYSSAGAALKM 121
            ++ SGFTEG VG G+DA G LG+KLD  R    TGLLP   +      +YS  G   K+
Sbjct: 70  AKLESGFTEGPVGFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKV 129

Query: 122 QLGNTQLRYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNS 181
           ++  + LR G +    PV    D RL      G  + + D       AGR T  N +D+S
Sbjct: 130 RVSKSTLRLGTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSS 189

Query: 182 STHDDFSGYGATTHNRAISLAGATFAPNGPFGAALYAGQLENTWRQAYLNL----NLAQG 237
              D   GYGA + +  +   G ++A       + Y  +L++ +RQ ++ L     LA+G
Sbjct: 190 GRDD--IGYGAASSDH-LDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEG 246

Query: 238 -NWRLDGNLYKTRDTGNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVGGD 296
            + R D   + +R+ G   AG ID   ++ +      A   +  +Q++ GD+ F FV G 
Sbjct: 247 VSLRSDLRYFDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGG 306

Query: 297 SIYLANAIKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAY 356
             +  N + Y  F   G  SWQ+RYD +F  +G PGLS M RY      DG HA      
Sbjct: 307 DPFTVNLVTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYT-----DGRHAETATV- 360

Query: 357 VNQYGDGGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYLIIEYPL 416
                  G+  ERD D+ YV+QSG  KD+SL + +V+ R+      + +D   LII Y L
Sbjct: 361 -----TNGRERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNGLT-NAVDENRLIIGYTL 414