Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  206 bits (524), Expect = 1e-57
 Identities = 144/423 (34%), Positives = 206/423 (48%), Gaps = 28/423 (6%)

Query: 6   HGPGRALLATLALWPALSHA----EAPGWSLLSRNYFLHSDFRSPSGSG-QNYRQEWAQG 60
           H P  AL  TL   P L+      E    +L +RNY+   DF    G+  Q+  +EWAQG
Sbjct: 3   HTPCVALGLTLLSQPLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQG 62

Query: 61  FIGEVRSGFTEGTVGVGIDAHGFLGLKLDGGRGHSGTGLLPRDSDGRAESEYSSAGAALK 120
           FI + +SG+T G VG G+DA G LG+KLD     + TGLLP   DGRA  EYS      K
Sbjct: 63  FILDFKSGYTPGPVGFGVDALGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLAPTFK 122

Query: 121 MQLGNTQLRYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAG--RFTAFNNQ 178
            +L  T+LR GE+    PV    D RL P    G  + +++     +QAG  + T   N+
Sbjct: 123 ARLSKTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNE 182

Query: 179 DNSSTHDDFSGY--GATTHNRAISLAGATFAPN-GPFGAALYAGQLENTWRQAYLNLNLA 235
                 +   G+       + A +  G  +A N      +L+ GQLE+ ++Q ++ L  +
Sbjct: 183 GGDGKMNAMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKHS 242

Query: 236 Q--GNWRLDGNL--YKTRDTGNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFD 291
           +  G+W L  NL  +  R+ G+A  G ID  A+  L     G  +    YQ + GD+PF 
Sbjct: 243 KPVGDWVLSANLGYFTAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSPFP 302

Query: 292 FVGGDSIYLANAIKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAP 351
            V  +   L N +   +F    E S+Q+RYD NFA +G PGL+   RY++G  +D     
Sbjct: 303 RVFANISPLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNVD----- 357

Query: 352 AGGAYVNQYGDGGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGDDIDRIYLI 411
                    G  G+  ERD+D+ Y VQSGA K L +   +   R+N      DID   L 
Sbjct: 358 ------TGLGYEGRDRERDLDIGYAVQSGALKGLGIRVRNAMARSNYR---SDIDENRLT 408

Query: 412 IEY 414
           + Y
Sbjct: 409 LVY 411