Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  184 bits (467), Expect = 4e-51
 Identities = 130/394 (32%), Positives = 188/394 (47%), Gaps = 29/394 (7%)

Query: 31  SLLSRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLGLKLDG 90
           SL  RN++++ D+   +  G+   +EW Q FI + +SG+T G VG G+D  G   +KLDG
Sbjct: 35  SLTLRNFYMNRDYTGTASQGK--AEEWTQSFIFDFKSGYTPGVVGFGVDVLGLYSIKLDG 92

Query: 91  GRGHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVFDTGDKRLHPE 150
           G+G +GT LLP   DGR   ++     A KM++  T+L+ GE     P+    D R  P+
Sbjct: 93  GKGTAGTQLLPVHDDGRPADDFGRTALAGKMRVSRTELKVGEWSPTLPILRADDGRSLPQ 152

Query: 151 YATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDFSGYGATTH-NRAISLAGATFAPN 209
              G  V + +     L  G+F   N+  N ++  D S +  T   +   + AG  +  N
Sbjct: 153 TLQGAQVTSNELAGLSLYGGQFRQ-NSPRNDASMQDMSLFTRTAFTSDRFNFAGGEYRFN 211

Query: 210 --GPFGAALYAGQLENTWRQAYLNLNLAQ--GNWRLDGNL--YKTRDTGNASAGAIDTLA 263
                  A YA QLE+ ++Q Y  +   Q  GNW L  NL  +  +D G A AG ++   
Sbjct: 212 QERTLVGAWYA-QLEDIYQQRYFQVQHQQPLGNWVLGANLGYFWGKDDGGAKAGELNNRT 270

Query: 264 YSLLAKYSFGAQALSVAYQKVEGDTPFDFVGGDS-IYLANAIKYADFNGPGEHSWQLRYD 322
            S L     G     V  QKV GD  +  V G S   LAN    + +    E SWQ+R+D
Sbjct: 271 ASGLFSAKLGGNTFYVGLQKVMGDDEWFRVNGASGGTLANDAFGSSYESARERSWQVRHD 330

Query: 323 LNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGKHWERDIDLKYVVQSGAA 382
            NF  LG PGL+LM RY+ G  +  +                    R+ +L YVVQSG  
Sbjct: 331 FNFVVLGIPGLTLMNRYIHGYNVHNASTQG----------------RESELAYVVQSGPF 374

Query: 383 KDLSLSFSHVSHRANQAQAGDDIDRIYLIIEYPL 416
           K L+L + + S R +     +  D   LI+ YPL
Sbjct: 375 KALNLKWRNSSQRRDWGST-NSFDENRLIVSYPL 407