Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  231 bits (589), Expect = 3e-65
 Identities = 133/390 (34%), Positives = 204/390 (52%), Gaps = 23/390 (5%)

Query: 34  SRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLGLKLDGGRG 93
           +RN + + DFR  + + Q+ R EWAQGFI    SG+T+GTVG G+DA G LG+KLD    
Sbjct: 49  TRNMYFNRDFRDGTSAQQSKRDEWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPD 108

Query: 94  HSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVFDTGDKRLHPEYAT 153
            + +GLLP   DG+A  EYS  G   K+++  T+L+ G ++ E P     D R+ P+   
Sbjct: 109 RTDSGLLPTHDDGKAADEYSKLGLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFE 168

Query: 154 GWWVENTDQPDWRLQAGRFTAFNNQDNSSTHD-----DFSGYGATTHNRAISLAGATFAP 208
           G  + + +        GR     ++++++  D         +G T     ++L G  +  
Sbjct: 169 GGLLTSKEIKGLTFTGGRIDKAKDRNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQF 228

Query: 209 NGPFGAALYAGQLENTWRQAYLNLNLAQ----GNWRLDGNLYKTRDTGNASAGAIDTLAY 264
                 + +  QL++ +RQ ++ +   Q    G    D  L  + D G A AG ID    
Sbjct: 229 TDRITGSYHFAQLDDIYRQHFIGMVATQPWGPGTLGADLRLAMSDDAGAAKAGNIDNTTV 288

Query: 265 SLLAKYSFGAQALSVAYQKVEGDTPFDFVGGDSIYLANAIKYADFNGPGEHSWQLRYDLN 324
           + +  Y+ G   +S A+Q++ G++ F +V G   YL N ++  DF G  E SWQ RYD N
Sbjct: 289 NGMLSYALGGHKVSAAWQQLSGESAFPYVDGADPYLVNFVQINDFAGADERSWQARYDYN 348

Query: 325 FATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGKHWERDIDLKYVVQSGAAKD 384
           FA LG PGL+ M RY+SG   D     AGG         GK WER+ +LKYVVQSG  K+
Sbjct: 349 FAALGVPGLTFMTRYISG---DNVSRAAGGE--------GKEWERNTELKYVVQSGPLKN 397

Query: 385 LSLSFSHVSHRANQAQAGDDIDRIYLIIEY 414
           +++   + + R+N A+   D D + L++ Y
Sbjct: 398 VAVRLRNATFRSNFAR---DADEVRLLVSY 424