Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  215 bits (547), Expect = 2e-60
 Identities = 140/389 (35%), Positives = 204/389 (52%), Gaps = 22/389 (5%)

Query: 35  RNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLGLKLDGGRGH 94
           RN++++ +F  P+   Q   +EW Q FI + RSGFT+GTVG G+D  G   +KLDGG+G 
Sbjct: 42  RNFYINRNFVDPAHP-QGKAEEWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGT 100

Query: 95  SGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVFDTGDKRLHPEYATG 154
           + T LLP   DGR   ++   G ALK +L  T+L+ GE M   P+  + D R  P+   G
Sbjct: 101 TNTHLLPVHGDGRPADDFGRLGVALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRG 160

Query: 155 WWVENTDQPDWRLQAGRFTAFNNQDNSSTHD-DFSGYGATTHNRAISLAGATFAPNGP-F 212
             + + +     L AG+F   + ++++S  D   +G  A T +R  +  G  +  N    
Sbjct: 161 GQLTSREIAGLTLYAGQFRGNSPRNDASMEDMSLNGKAAFTSDR-FNFGGGEYTFNDKRT 219

Query: 213 GAALYAGQLENTWRQAYLNLNLAQ--GNWRLDGNL--YKTRDTGNASAGAIDTLAYSLLA 268
              L+  QL++ +RQ YLNL  +Q  G+W L  NL  +  ++ G   AG +D    S L 
Sbjct: 220 MIGLWDAQLKDIYRQQYLNLTHSQPLGDWTLGANLGYFIGKEDGAERAGKLDNRTASALL 279

Query: 269 KYSFGAQALSVAYQKVEGDTPFDFVGGDS-IYLANAIKYADFNGPGEHSWQLRYDLNFAT 327
              +      V  QKV GD  +  V G S   LAN    + F+   E SWQ+R+D NFAT
Sbjct: 280 SARYQGHTFYVGLQKVSGDDAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFAT 339

Query: 328 LGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGKHWERDIDLKYVVQSGAAKDLSL 387
           +G PGL+LM RY+ G  +                D GK W R+ +L YVVQSG+ KDLSL
Sbjct: 340 VGVPGLTLMNRYIKGDNVTVGSV-----------DDGKEWARETELAYVVQSGSFKDLSL 388

Query: 388 SFSHVSHRANQAQAGDDIDRIYLIIEYPL 416
            + + + R + +    D +R  LI+ YPL
Sbjct: 389 KWRNSTMRRDFSTNAFDENR--LIVSYPL 415