Pairwise Alignments

Query, 420 a.a., proline-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  246 bits (628), Expect = 1e-69
 Identities = 149/413 (36%), Positives = 227/413 (54%), Gaps = 27/413 (6%)

Query: 26  EAPGWSLLSRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLG 85
           E   ++L  RN + + D  +   +G    +EW QG +    SG+T G VG G+DAH  LG
Sbjct: 34  EGSSFNLHFRNAYFNRDNHN---AGVRDTREWGQGAVARFESGYTPGVVGFGLDAHAMLG 90

Query: 86  LKLDGGRGHSGTGLLPR----DSD-GRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVF 140
           LKLDGG GH+GT +LP     D + G A   +S+AGAA+K++  +T+L+ G++ +  PV 
Sbjct: 91  LKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNPVI 150

Query: 141 DTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDFSGY--GATTHNRA 198
             G+ R+ P+   G  + NT      L+ G+  +F +  N S H     Y      H+++
Sbjct: 151 AGGETRMLPQTFRGVSLTNTSIDGLLLEGGQ-VSFTHPYNQSGHRRIDTYYGSLDEHDKS 209

Query: 199 --ISLAGATFAPNGPFGAALYAGQLENTWRQAYLNLNLAQ-----GNWRLDGNLYKTRDT 251
             ++ AGA+++      A LYA +L++ W Q Y + +         +     + Y T+DT
Sbjct: 210 KHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLNPGVHFYHTQDT 269

Query: 252 GNASAGAIDTLAYSLLAKYSFGAQALSVAYQKVEGDTPFDFVG-GDSIYLANAIKYADFN 310
           G A  G ID   YS+    + G  +++ AYQ+V G+TPFD++  GDS+YL N+  Y+DFN
Sbjct: 270 GQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDYINLGDSVYLDNSRMYSDFN 329

Query: 311 GPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGK---HW 367
            P E SW+L+Y  +FA +G PGLS    Y  G   D + A     + + Y + GK   HW
Sbjct: 330 APNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEA-DLTKATQDTTHYDYYREDGKNAMHW 388

Query: 368 ERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQA----GDDIDRIYLIIEYPL 416
           ERD+D+KYV Q G  KDLS+   + +HR +Q  A      D D + +I++YPL
Sbjct: 389 ERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNSDNDELRVIVDYPL 441