Pairwise Alignments

Query, 134 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 291 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 71.6 bits (174), Expect = 8e-18
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 4/111 (3%)

Query: 24  LQTPGALTPARLRRAKELM---LHSPLSIIEIAAVCNLTRSHFSRAFKVNTGLSPQAWRL 80
           L+  G L   + RR  E +   L  P+S+ ++A +C L+  HF+R F+ + GL P  + L
Sbjct: 178 LRLKGGLAAHQRRRLAEYIDQHLEDPISLGQLAGMCALSEYHFARMFRQSFGLPPHQYLL 237

Query: 81  LARMEKAKRLLATEA-PITHVSLECGFCDQAHFTRAFSRLVGQPPKAWRQA 130
             R+ +A+ LL + A P+  ++L CGF   +HFT  F + +G  P  +RQA
Sbjct: 238 ARRLTRAQALLRSGALPLGEIALMCGFSSASHFTHRFRQAMGATPGEYRQA 288



 Score = 22.7 bits (47), Expect = 0.004
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 94  EAPITHVSLECGFC--DQAHFTRAFSRLVGQPPKAWRQAQTLS 134
           E PI+   L  G C   + HF R F +  G PP  +  A+ L+
Sbjct: 201 EDPISLGQL-AGMCALSEYHFARMFRQSFGLPPHQYLLARRLT 242